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Protein Alignment CG6610 and LSM1
DIOPT Version :10
| Sequence 1: | NP_648022.1 |
Gene: | CG6610 / 38693 |
FlyBaseID: | FBgn0035675 |
Length: | 91 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_012411.1 |
Gene: | LSM1 / 853318 |
SGDID: | S000003660 |
Length: | 172 |
Species: | Saccharomyces cerevisiae |
| Alignment Length: | 69 |
Identity: | 16/69 - (23%) |
| Similarity: | 36/69 - (52%) |
Gaps: | 5/69 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 23 IGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEYENTPDGRRITKLDQ--ILLNGNNITMLVP 85
:..:|.:::::.:.:.|.|..||.:.|::|.|..|.....:..:..:.|: .::.|.|:.||
Yeast 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVML-- 112
Fly 86 GGEL 89
||:
Yeast 113 -GEV 115
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG6610 | NP_648022.1 |
LSm5 |
12..87 |
CDD:212479 |
14/65 (22%) |
| LSM1 | NP_012411.1 |
LSm1 |
40..115 |
CDD:212475 |
15/67 (22%) |
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