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Protein Alignment CG6610 and LSM1B
DIOPT Version :10
| Sequence 1: | NP_648022.1 |
Gene: | CG6610 / 38693 |
FlyBaseID: | FBgn0035675 |
Length: | 91 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_566476.1 |
Gene: | LSM1B / 820624 |
AraportID: | AT3G14080 |
Length: | 128 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 71 |
Identity: | 17/71 - (23%) |
| Similarity: | 36/71 - (50%) |
Gaps: | 17/71 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 26 RIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTE-------YENTPDGRRITKLDQILLNGNNITML 83
::.:::::.::::|||..||.|.|.:|:...| |.:.| |...::.|.|:.::
plant 22 KLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIP-------LGLYVIRGENVVLI 79
Fly 84 VPGGEL 89
|||
plant 80 ---GEL 82
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG6610 | NP_648022.1 |
LSm5 |
12..87 |
CDD:212479 |
14/67 (21%) |
| LSM1B | NP_566476.1 |
LSm1 |
12..82 |
CDD:212475 |
15/69 (22%) |
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