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Protein Alignment CG6610 and SmD3
DIOPT Version :9
Sequence 1: | NP_001261461.1 |
Gene: | CG6610 / 38693 |
FlyBaseID: | FBgn0035675 |
Length: | 91 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_725106.1 |
Gene: | SmD3 / 36306 |
FlyBaseID: | FBgn0023167 |
Length: | 151 |
Species: | Drosophila melanogaster |
Alignment Length: | 78 |
Identity: | 19/78 - (24%) |
Similarity: | 36/78 - (46%) |
Gaps: | 17/78 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 MPLELVDKCIGSRIHIIMKNDKEMV------GTLLGFDDFVNMLLDDVT-EYENTPDGRRITKLD 71
:|::::.:..| ||| ..|.: |.|:..:|.:|..:..:| .|. || |...|:
Fly 5 VPIKVLHEAEG---HII---TCETITGEVYRGKLIEAEDNMNCQMTQITVTYR---DG-RTANLE 59
Fly 72 QILLNGNNITMLV 84
.:.:.|:.|..|:
Fly 60 NVYIRGSKIRFLI 72
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG6610 | NP_001261461.1 |
LSm5 |
12..87 |
CDD:212479 |
19/78 (24%) |
SmD3 | NP_725106.1 |
Sm_D3 |
6..75 |
CDD:212468 |
19/77 (25%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1958 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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