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Protein Alignment CG6610 and lsm-6
DIOPT Version :10
| Sequence 1: | NP_648022.1 |
Gene: | CG6610 / 38693 |
FlyBaseID: | FBgn0035675 |
Length: | 91 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001379827.1 |
Gene: | lsm-6 / 190601 |
WormBaseID: | WBGene00003080 |
Length: | 77 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 66 |
Identity: | 18/66 - (27%) |
| Similarity: | 31/66 - (46%) |
Gaps: | 3/66 - (4%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 15 PLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEYENTPDGRRITKLDQILLNGNN 79
|.|.:.|.||..:.:.:.:..:..|.|...|.::|:.|:...||.| |:...|.....:.|||
Worm 7 PAEFLKKVIGKPVVVKLNSGVDYRGILACLDGYMNIALEQTEEYSN---GQLQNKYGDAFIRGNN 68
Fly 80 I 80
:
Worm 69 V 69
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG6610 | NP_648022.1 |
LSm5 |
12..87 |
CDD:212479 |
18/66 (27%) |
| lsm-6 | NP_001379827.1 |
LSm6 |
6..73 |
CDD:212473 |
18/66 (27%) |
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