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Protein Alignment CG6610 and lsm-1
DIOPT Version :10
| Sequence 1: | NP_648022.1 |
Gene: | CG6610 / 38693 |
FlyBaseID: | FBgn0035675 |
Length: | 91 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_496385.1 |
Gene: | lsm-1 / 174700 |
WormBaseID: | WBGene00003076 |
Length: | 125 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 93 |
Identity: | 21/93 - (22%) |
| Similarity: | 44/93 - (47%) |
Gaps: | 21/93 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 VPPPSNISTLMPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTE-------YENT 61
:|.|.....:...|.:|| ::.:::::.::::|.|...|.|.|::|:||.| :..|
Worm 3 LPDPYLPGAISLFEQLDK----KLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCET 63
Fly 62 PDGRRITKLDQILLNGNNITMLVPGGEL 89
..| .:|:.|.|:.: .||:
Worm 64 GQG-------FMLIRGENVEL---AGEI 81
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG6610 | NP_648022.1 |
LSm5 |
12..87 |
CDD:212479 |
17/81 (21%) |
| lsm-1 | NP_496385.1 |
LSm1 |
8..81 |
CDD:212475 |
18/86 (21%) |
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