DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6610 and LSm1

DIOPT Version :10

Sequence 1:NP_648022.1 Gene:CG6610 / 38693 FlyBaseID:FBgn0035675 Length:91 Species:Drosophila melanogaster
Sequence 2:XP_321407.3 Gene:LSm1 / 1281490 VectorBaseID:AGAMI1_003627 Length:134 Species:Anopheles gambiae


Alignment Length:71 Identity:15/71 - (21%)
Similarity:35/71 - (49%) Gaps:7/71 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEYENTPDGRRITKLDQILLNGNNITML 83
            |||    ::.:::.:.:.::|.|...|.|.|::|....|..:..:.....:...:::.|.|:.:|
Mosquito    15 VDK----KLMVLLHDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVVIIRGENVVLL 75

  Fly    84 VPGGEL 89
               ||:
Mosquito    76 ---GEI 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6610NP_648022.1 LSm5 12..87 CDD:212479 13/67 (19%)
LSm1XP_321407.3 LSm1 5..78 CDD:212475 14/69 (20%)

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