DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6610 and LSM6

DIOPT Version :10

Sequence 1:NP_648022.1 Gene:CG6610 / 38693 FlyBaseID:FBgn0035675 Length:91 Species:Drosophila melanogaster
Sequence 2:NP_009011.1 Gene:LSM6 / 11157 HGNCID:17017 Length:80 Species:Homo sapiens


Alignment Length:66 Identity:16/66 - (24%)
Similarity:31/66 - (46%) Gaps:3/66 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEYENTPDGRRITKLDQILLNGNN 79
            |.:.:.:.||..:.:.:.:..:..|.|...|.::|:.|:...||.|   |:...|.....:.|||
Human     8 PSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVN---GQLKNKYGDAFIRGNN 69

  Fly    80 I 80
            :
Human    70 V 70

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6610NP_648022.1 LSm5 12..87 CDD:212479 16/66 (24%)
LSM6NP_009011.1 LSm6 7..74 CDD:212473 16/66 (24%)

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