DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42269 and OCT6

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_173087.1 Gene:OCT6 / 838207 AraportID:AT1G16370 Length:521 Species:Arabidopsis thaliana


Alignment Length:613 Identity:140/613 - (22%)
Similarity:235/613 - (38%) Gaps:135/613 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HRRKSGGGNKELQLDMGGFKKGQEMAGGNGSDSLPPSMDFDDIL-PLIGEFGRYQKLLFICMIPF 96
            |.....|.|::.:|:                     ::.||.|: ..:.:||.:|          
plant    12 HLTDDSGVNEKTRLE---------------------ALTFDKIVEQSLSDFGFWQ---------- 45

  Fly    97 SFF------VAFVY-FSQIFLTLIPEQHWCHVPELDGLDVEARLALSIPMTNGEYNNCY--MYDV 152
             ||      :|.:: ..|||:|:                               |.:.|  .:.:
plant    46 -FFQISLVGLALLFDAQQIFITV-------------------------------YTDAYPTWHCL 78

  Fly   153 NYTDILAQGKVMADPKWPQVKC---RHGWSYNFTEIPYATVATEQNWVCDDAALPTYAQSIFFLG 214
            |:|        :.||....: |   |..|.::... ...:|.:|....|..:.|.....|.|::|
plant    79 NHT--------ICDPSASDI-CKLPRSAWEWDGGS-QGKSVISEFGLECSSSLLRGMPSSAFYIG 133

  Fly   215 AIVGGLLFGWVA-DRFGRIPALIGTNMMGLLAGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMMYI 278
            |||||.....:. |..||...::.:.....:..:...|.:|.|.:..::|.:||:....::...:
plant   134 AIVGGFFLALIPDDSLGRKKLVLFSTFAMSITSISVIFSTNVWIYTFLKFIIGFSRSQTWSYALV 198

  Fly   279 LVLEYVGPKYRTFVANMSIAIFFTGAACLLPWIAYFLAD--WKLLAIVTSAP-LLLAIFTPFVVP 340
            |:.|.|..::|.....:...:|..|... |..||:...|  |:.|.:.||.| :...||......
plant   199 LISERVSTRWRPRATMIPFTLFVLGFMS-LSGIAFLAQDSSWRYLYLYTSVPAVFYCIFLYLFAL 262

  Fly   341 ESARWLVSQGKVDKAVGILKKL---EKGNGRQVPPQTYQIFTDSCKRMQEQEAQNGKYSVLDLFK 402
            ||.|||..|||..:|:.:|.|:   ||.....|        .......||...|...||:.|.|.
plant   263 ESPRWLHMQGKDKEAIDVLTKMSPKEKAYLESV--------VSKLPLKQENFEQAPTYSIKDFFF 319

  Fly   403 SPRLRRTTLLLIVIWMAISLVFDGHVRNVGSLGLDIFFTFTLACFTELPADTLLTVILDRFGRRW 467
            .....|..|::::|...:.:.:.|.......:.::|:.:.||....|||...:..::|:||.||.
plant   320 RKWAFRRILVVMIIMFGLGISYYGVPLAARDIDVNIYLSETLNALVELPTFVITPILLERFNRRS 384

  Fly   468 LACSSMVLSGVFSLLATVVPV-GIYSAALAI-MGRFF-VNISYNIGLQWAAEVLPTVVRAQAVAF 529
            ....:.:|.|...:|..|:.: |....|.|. :|.|| ..|.:|:...:..|:.||.||:.|...
plant   385 SVLVNTLLGGASGVLCFVLSILGKTEIAFAFELGTFFCARIGFNLMAVFMVEMFPTCVRSSATMM 449

  Fly   530 IHIMGYVASIIAPFVVYLANISQALPLIILGILGIIG---GLLALLLPETLNHVLPQTLSDGEEF 591
            ......|.....|.:   |:|.:.:|.:...|.||..   |:..|:||||               
plant   450 FRQALVVGGACCPLI---ASIGRYIPSVSFAIFGIAMSGLGMFVLILPET--------------- 496

  Fly   592 GRGQSIWDFPCLAKQVDDDEDEKRNADV 619
             :|.|:.|        ..:|.|||:..|
plant   497 -KGLSLCD--------SMEEQEKRDQAV 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 115/493 (23%)
MFS 206..545 CDD:119392 90/348 (26%)
OCT6NP_173087.1 MFS_OCT_plant 88..494 CDD:340936 105/419 (25%)
xylE <220..>314 CDD:182225 31/102 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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