DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42269 and Slc22a17

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001347335.1 Gene:Slc22a17 / 59049 MGIID:1926225 Length:520 Species:Mus musculus


Alignment Length:537 Identity:149/537 - (27%)
Similarity:226/537 - (42%) Gaps:74/537 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 SQIFLTLIPEQHWCHV-------------PELDGLDVEARLALSIPMTNGEYNNCYMYDVNYTDI 157
            |....||.|..| ||.             |...|:.| |..||:....:|.        |..||.
Mouse     3 SDPIFTLAPPLH-CHYGALPPNASGWEQPPNSSGVSV-AGAALAASAASGV--------VTSTDP 57

  Fly   158 LAQGKVMADPKWPQVKCRHGWSYNFTEIPYATVATEQNW--VCDDAALPTYAQSIFFLGAIVGGL 220
            ...|  .|.|.:..  |...|.||  .:|..|......|  |||........|.:|.||...|.|
Mouse    58 SCSG--FAPPDFNH--CLKDWDYN--GLPVLTTNAIGQWDLVCDLGWQVILEQILFILGFASGYL 116

  Fly   221 LFGWVADRFGRIPALIGTNMMGLL--AGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLEY 283
            ..|:.||||||...::.|  :||:  .|||.|...:......:||.:||........:|::.||.
Mouse   117 FLGYPADRFGRRGIVLLT--LGLVGPCGVGGAAAGSSTGIMALRFLLGFLLAGVDLGVYLMRLEL 179

  Fly   284 VGPKYRTFVANMSIAIFFTGAACLLPWIAYFLADWKLLAIVTSAPLLLAIF--TPFVVPESARWL 346
            ..|..|..|| ::..:...|...|...:|....||:.|..:.:||.:|.:|  .|.:..||||||
Mouse   180 CDPTQRLRVA-LAGELVGVGGHFLFLGLALVSKDWRFLQRMITAPCILFLFYGWPGLFLESARWL 243

  Fly   347 VSQGKVDKAVGILKKLEKGNGRQVPPQTYQIFTDSCKRMQEQE-----AQNGKYSVLDLFKSPRL 406
            :.:.::::|..:|:.|.:.|    .|....:..::.:.:||.|     .....:|...|.....:
Mouse   244 IVKRQIEEAQSVLRILAERN----RPHGQMLGEEAQEALQELENTCPLPATSTFSFASLLNYRNI 304

  Fly   407 RRTTLLL---IVIWMAISLVFDGHVRNVGSLG--LDIFFTFTLACFTELPADTLLTVILDRFGRR 466
            .:..|:|   ..|..||...:    :.||..|  .|.:....||..|...|...|.|.:||||||
Mouse   305 WKNLLILGFTNFIAHAIRHCY----QPVGGGGSPSDFYLCSLLASGTAALACVFLGVTVDRFGRR 365

  Fly   467 WLACSSMVLSGVFSLLATVVPVGIY----SAAL---AIMGRFFVNISYNIGLQWAAEVLPTVVRA 524
            .:...||.|:|:    |::|.:|::    .||:   :::|.|....|..:....|:||:||.||.
Mouse   366 GILLLSMTLTGI----ASLVLLGLWDYLNDAAITTFSVLGLFSSQASAILSTLLASEVIPTTVRG 426

  Fly   525 QAVAFIHIMGYVASIIAPFVVYLANISQALPLIILGILGIIGGLLALLLPETLNHVLPQTLSDGE 589
            :.:..|..:|.:..:..|...........|..::|....::..|..:|||||...:||:.|.|||
Mouse   427 RGLGLIMALGALGGLSCPAQRLHMGHGAFLQHVVLAACALLCILSIMLLPETKRKLLPEVLRDGE 491

  Fly   590 EFGRGQSIWDFPCLAKQ 606
            ...|       |.|.:|
Mouse   492 LCRR-------PSLLRQ 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 131/481 (27%)
MFS 206..545 CDD:119392 101/359 (28%)
Slc22a17NP_001347335.1 MFS_SLC22A17 63..476 CDD:341003 117/431 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843388
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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