DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42269 and Svopl

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:466 Identity:109/466 - (23%)
Similarity:185/466 - (39%) Gaps:98/466 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 PQVKCRHGWSYNFTEIPYATVATEQNWVCDDAALPTYAQSIFFLGAIVGGLLFGWVADRFGRIPA 234
            |.::|.  |..             :||..      .:..::.|.|.:|..:|||.:|||:||...
  Rat    25 PVIRCE--WQL-------------ENWQV------AFVTTMVFFGYMVSSILFGLLADRYGRWKI 68

  Fly   235 LIGTNMMGLLAGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLEYVGPKYRTFVANMSIAI 299
            |:.:.:.|....:.|:|..::..|..:|..||..... .....|:..|::..|||.::..:|...
  Rat    69 LLLSFLWGAYFSLLTSFSPSYIWFVFLRTMVGCGVSG-HAQGLIIKTEFLPTKYRGYMLPLSQVF 132

  Fly   300 FFTG-------AACLLPWIAYFLADWKLLAIVTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVG 357
            :..|       |:.::|.|.     |:.|..:.|.|.::.|.....:|||||:.||.|....|:.
  Rat   133 WLAGSLLIISMASVVIPTIG-----WRWLIRIASIPGIILIMAFKFIPESARFNVSTGNTQAALD 192

  Fly   358 ILKKLEKGNGRQVPPQTYQIFTDSCKRMQEQEAQ-NGKYSVLDLFKSPRLRRTTLLLIVIWMAIS 421
            .|:.:.|.| |.|.|:         .|:.|...: .|:::  ||.:|..| ||||.:.:||:.||
  Rat   193 TLESIAKMN-RSVMPE---------GRLVEPILEKRGRFA--DLLESKYL-RTTLQIWIIWLGIS 244

  Fly   422 LVFDG------------------------HVRNVGS------------LGLDIFFTFTLACFTEL 450
            ..:.|                        .|.|:|.            .....:.|..::...|:
  Rat   245 FAYYGVILASAELLERDLVCGSKSESEPEVVENMGDAEEGRSPCYCHMFAPSDYRTMIISTLGEI 309

  Fly   451 PADTLLTVILDRFGRRWLACSSMVLSGVFSLLATVVPVGIYSAALAIMGRFFVNISYNIGLQWAA 515
            ..:.|..:.::..|||.....:|..:.:|.||..:............|.|..|..::|....:.|
  Rat   310 ALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTIYIYTA 374

  Fly   516 EVLPTVVRAQAVAFIHIMGYVASIIAPFVVYLANISQAL-------PLIILGILGIIGGLLALLL 573
            ||.||.:||..:.....:..:.:::|||      |||.|       .|.:...:.::..:.|..|
  Rat   375 EVYPTPMRALGMGTSGSLCRIGAMVAPF------ISQVLMSASFLGALCLFSSVCVVCAISAFTL 433

  Fly   574 P-ETLNHVLPQ 583
            | ||....|.|
  Rat   434 PIETKGRALQQ 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 98/425 (23%)
MFS 206..545 CDD:119392 92/382 (24%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 103/454 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347245
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

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