DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42269 and Slc22a17

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_803156.2 Gene:Slc22a17 / 305886 RGDID:631405 Length:520 Species:Rattus norvegicus


Alignment Length:538 Identity:150/538 - (27%)
Similarity:224/538 - (41%) Gaps:76/538 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 SQIFLTLIPEQHWCHV-------------PELDGLDVE-ARLALSIPMTNGEYNNCYMYDVNYTD 156
            |....||.|..| ||.             |...|:.|. |.||.|....          .|..||
  Rat     3 SDPIFTLAPPLH-CHYGALPPNASGWEQPPNSSGVSVAGAALAASAASR----------VVTSTD 56

  Fly   157 ILAQGKVMADPKWPQVKCRHGWSYNFTEIPYATVATEQNW--VCDDAALPTYAQSIFFLGAIVGG 219
            ....|  .|.|.:..  |...|.||  .:|..|......|  |||........|.:|.||...|.
  Rat    57 PSCSG--FAPPDFNH--CLKDWDYN--GLPVLTTNAIGQWDLVCDLGWQVILEQILFILGFASGY 115

  Fly   220 LLFGWVADRFGRIPALIGTNMMGLL--AGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLE 282
            |..|:.||||||...::.|  :||:  .|||.|...:......:||.:||........:|::.||
  Rat   116 LFLGYPADRFGRRGIVLLT--LGLVGPCGVGGAAAGSSTGIMTLRFLLGFLLAGVDLGVYLMRLE 178

  Fly   283 YVGPKYRTFVANMSIAIFFTGAACLLPWIAYFLADWKLLAIVTSAPLLLAIF--TPFVVPESARW 345
            ...|..|..|| ::..:...|...|...:|....||:.|..:.:||.:|.:|  .|.:..|||||
  Rat   179 LCDPTQRLRVA-LAGELVGVGGHFLFLGLALVSKDWRFLQRMITAPCILFLFYGWPGLFLESARW 242

  Fly   346 LVSQGKVDKAVGILKKLEKGNGRQVPPQTYQIFTDSCKRMQEQE-----AQNGKYSVLDLFKSPR 405
            |:.:.::::|..:|:.|.:.|    .|....:..::.:.:||.|     .....:|...|.....
  Rat   243 LIVKRQIEEAQSVLRILAERN----RPHGQMLGEEAQEALQELENTCPLPTTSTFSFASLLNYRN 303

  Fly   406 LRRTTLLL---IVIWMAISLVFDGHVRNVGSLG--LDIFFTFTLACFTELPADTLLTVILDRFGR 465
            :.:..|:|   ..|..||...:    :.||..|  .|.:....||..|...|...|.|.:|||||
  Rat   304 IWKNLLILGFTNFIAHAIRHCY----QPVGGGGSPSDFYLCSLLASGTAALACVFLGVTVDRFGR 364

  Fly   466 RWLACSSMVLSGVFSLLATVVPVGIY----SAAL---AIMGRFFVNISYNIGLQWAAEVLPTVVR 523
            |.:...||.|:|:    |::|.:|::    .||:   :::|.|....|..:....||||:||.||
  Rat   365 RGILLLSMTLTGI----ASLVLLGLWDYLNDAAITTFSVLGLFSSQASAILSTLLAAEVIPTTVR 425

  Fly   524 AQAVAFIHIMGYVASIIAPFVVYLANISQALPLIILGILGIIGGLLALLLPETLNHVLPQTLSDG 588
            .:.:..|..:|.:..:..|...........|..::|....::..|..:|||||...:||:.|.||
  Rat   426 GRGLGLIMALGALGGLSCPAQRLHMGHGAFLQHVVLAACALLCILSIMLLPETKRKLLPEVLRDG 490

  Fly   589 EEFGRGQSIWDFPCLAKQ 606
            |...|       |.|.:|
  Rat   491 ELCRR-------PSLLRQ 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 132/482 (27%)
MFS 206..545 CDD:119392 102/359 (28%)
Slc22a17NP_803156.2 MFS 106..476 CDD:119392 105/384 (27%)
2A0114 111..475 CDD:273326 101/378 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346902
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.030

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