DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42269 and Slc22a1

DIOPT Version :10

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_036829.1 Gene:Slc22a1 / 24904 RGDID:3224 Length:556 Species:Rattus norvegicus


Alignment Length:550 Identity:168/550 - (30%)
Similarity:275/550 - (50%) Gaps:43/550 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 DDILPLIGEFGRYQKLLFICMIPFSFFVAFVYFSQIFLTLIPEQHWCHVP---ELD---GLDVEA 131
            ||:|..:||||.:||..|:.:...|..:|.:|...:||...| .|:|..|   ||.   |.....
  Rat     5 DDVLEQVGEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTP-GHYCQNPGVAELSQRCGWSQAE 68

  Fly   132 RLALSIPMTNGE-----YNNCYMYDVNYTDILAQGKVMADP---------KWPQVKCRHGWSYNF 182
            .|..::|.....     .:.|..|:|::......   ..||         :.|...|.|||.|  
  Rat    69 ELNYTVPGLGPSDEASFLSQCMRYEVDWNQSTLD---CVDPLSSLVANRSQLPLGPCEHGWVY-- 128

  Fly   183 TEIPYATVATEQNWVCDDAALPTYAQSIFFLGAIVGGLLFGWVADRFGRIPALIGTNMMGLLAGV 247
             :.|.:::.||.|.||.||......||...||..:|.|:.|::||||||...|:.|.::..::||
  Rat   129 -DTPGSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLCLLVTTLVTSVSGV 192

  Fly   248 GTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLEYVGPKYRTFVA---NMSIAIFFTGAACLLP 309
            .||...::....:.|...|......:...|.|:.|:||..||...|   .|:..:...|    |.
  Rat   193 LTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQMAFTVGLVG----LA 253

  Fly   310 WIAYFLADWKLLAIVTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVGILKKLEKGNGRQVPPQT 374
            .:||.:.||:.|.:..|.|..|.:...:.||||.|||:||.:..:||.|::::.:.||: |||..
  Rat   254 GVAYAIPDWRWLQLAVSLPTFLFLLYYWFVPESPRWLLSQKRTTRAVRIMEQIAQKNGK-VPPAD 317

  Fly   375 YQIFTDSCKRMQEQEAQNGKYSVLDLFKSPRLRRTTLLLIVIWMAISLVFDGHVRNVGSLGLDIF 439
            .::.   |  ::|..::....|..|||::|.||:.|::|:.:|.:.::::.|.:.:||:.|.:::
  Rat   318 LKML---C--LEEDASEKRSPSFADLFRTPNLRKHTVILMYLWFSCAVLYQGLIMHVGATGANLY 377

  Fly   440 FTFTLACFTELPADTLLTVILDRFGRRWLACSSMVLSGVFSLLATVVPVGIY--SAALAIMGRFF 502
            ..|..:...|.||..::.|.:||.||.:...:|.:::|...||...:|..::  :..||.:||..
  Rat   378 LDFFYSSLVEFPAAFIILVTIDRIGRIYPIAASNLVTGAACLLMIFIPHELHWLNVTLACLGRMG 442

  Fly   503 VNISYNIGLQWAAEVLPTVVRAQAVAFIHIMGYVASIIAPFVVY-LANISQALPLIILGILGIIG 566
            ..|...:.....||:.||.:|...:.....:..:..|..||:|: |..:.||||||:.|:||:..
  Rat   443 ATIVLQMVCLVNAELYPTFIRNLGMMVCSALCDLGGIFTPFMVFRLMEVWQALPLILFGVLGLTA 507

  Fly   567 GLLALLLPETLNHVLPQTLSDGEEFGRGQS 596
            |.:.||||||....||:|:.:.|..||.:|
  Rat   508 GAMTLLLPETKGVALPETIEEAENLGRRKS 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 142/497 (29%)
Slc22a1NP_036829.1 2A0119 12..525 CDD:273328 160/529 (30%)
Proline-rich sequence. /evidence=ECO:0000250|UniProtKB:O15245 284..288 3/3 (100%)

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