DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42269 and Slc22a12

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_033229.3 Gene:Slc22a12 / 20521 MGIID:1195269 Length:553 Species:Mus musculus


Alignment Length:571 Identity:153/571 - (26%)
Similarity:263/571 - (46%) Gaps:60/571 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 MDFDDILPLIGEFGRYQKLLFICMIPFSFFVAFVYFSQIFLTLIPEQHWCHVPELDG-------- 126
            |.|.::|..:|..||:|....:.::....:|......:.|...:| .|.|.||.||.        
Mouse     1 MAFPELLDRVGGLGRFQLFQTVALVTPILWVTTQNMLENFSAAVP-HHRCWVPLLDNSTSQASIP 64

  Fly   127 --LDVEARLALSIPM-TNGEYNNCYMYDVNYTDILAQGKVMADPKWPQVK--------------- 173
              |..:..||:|||. .:.:.:.|..:              ..|:|...:               
Mouse    65 GDLGPDVLLAVSIPPGPDQQPHQCLRF--------------RQPQWQLTESNATATNWSDAATEP 115

  Fly   174 CRHGWSYNFTEIPYATVATEQNWVCDDAALPTYAQSIFFLGAIVGGLLFGWVADRFGRIPALIGT 238
            |..||.|:.:.. .:|:.|..:.||:..||...|||||..|.:||..:.|..:|||||...|..:
Mouse   116 CEDGWVYDHSTF-RSTIVTTWDLVCNSQALRPMAQSIFLAGILVGAAVCGHASDRFGRRRVLTWS 179

  Fly   239 NMMGLLAGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLEYVGPKYRTFVANMSIAIFFTG 303
            .::..::|...||:..|..:.:.||.:..|..........|::|:...:....|..:: |:.|:.
Mouse   180 YLLVSVSGTAAAFMPTFPLYCLFRFLLASAVAGVMMNTASLLMEWTSAQGSPLVMTLN-ALGFSF 243

  Fly   304 AACLLPWIAYFLADWKLLAIVTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVGILKKLEKGNGR 368
            ...|...:||.:..|::|.:..|||..|.....:.:|||||||::.||:|:.:..|:::...|.|
Mouse   244 GQVLTGSVAYGVRSWRMLQLAVSAPFFLFFVYSWWLPESARWLITVGKLDQGLQELQRVAAVNRR 308

  Fly   369 QVPPQTYQIFTDSCKRMQEQEAQNGK--YSVLDLFKSPRLRRTTLLLIVIWMAISLVFDGHVRNV 431
            :....|  :..:..:...|:|....|  .|:..|..:|.||..|::.::.|.|....|.|...::
Mouse   309 KAEGDT--LTMEVLRSAMEEEPSRDKAGASLGTLLHTPGLRHRTIISMLCWFAFGFTFYGLALDL 371

  Fly   432 GSLGLDIFFTFTLACFTELPADTLLTVILDRFGRRWLACSSMVLSGVFSLLATVVP--VGIYSAA 494
            .:||.:||....|....:.|..|...:::.|.|||....|.:||.|:..|...:||  :|:..:|
Mouse   372 QALGSNIFLLQALIGIVDFPVKTGSLLLISRLGRRLCQVSFLVLPGLCILSNILVPHGMGVLRSA 436

  Fly   495 LAIMGRFFVNISYNIGLQWAAEVLPTVVRAQAVAFIHIMGYVASIIAPFVVYLANISQALPLIIL 559
            ||::|...:..::.....:::|:.|||:|..||....:.....:::.|.|..|......:||::.
Mouse   437 LAVLGLGCLGGAFTCITIFSSELFPTVIRMTAVGLCQVAARGGAMLGPLVRLLGVYGSWMPLLVY 501

  Fly   560 GILGIIGGLLALLLPETLNHVLPQTLSDGEEFGRGQSIWDFPCLAKQVDDD 610
            |::.::.||.|||||||.|..||.|:.|.::    ||:       |:|..|
Mouse   502 GVVPVLSGLAALLLPETKNLPLPDTIQDIQK----QSV-------KKVTHD 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 128/501 (26%)
MFS 206..545 CDD:119392 94/342 (27%)
Slc22a12NP_033229.3 2A0119 11..526 CDD:273328 143/533 (27%)
MFS 147..516 CDD:119392 104/371 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843330
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.950

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