DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42269 and suex-2

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_501556.2 Gene:suex-2 / 183742 WormBaseID:WBGene00008271 Length:502 Species:Caenorhabditis elegans


Alignment Length:497 Identity:97/497 - (19%)
Similarity:186/497 - (37%) Gaps:123/497 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LLFICMIPFSFFVAFVYFSQIFLTLIP-----EQHWCHVPELDGLDVEARLALSIPMTNGEYNNC 147
            :|:...:.||..:.||    |||..:|     :.::|:       .::::..:..     ::|..
 Worm    13 VLYQITLIFSAQLIFV----IFLDFMPSTYCTDDNFCY-------KLQSKCLMDY-----DHNAQ 61

  Fly   148 YMYDVNYTDILAQGKVMADPKWPQVKCRHG-WSYNFTEIPYATVATEQNWVCDDAALPTYAQSIF 211
            .:..||.|:  ...|.:||         |. ..:...:..|....|..|......|.        
 Worm    62 NLCPVNMTE--NASKCIAD---------HSRLFFRSAQFEYQQDCTGLNGFSLSTAT-------- 107

  Fly   212 FLGAIVGGLLFGWVADRFGRIPALIGTNMMGLLAGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMM 276
            |:|.::|.:..|::||::||....:.:.:.|:...|.:|.::|.:.|.|.|..:|.:.....|:.
 Worm   108 FIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILIGISVSGTLTVG 172

  Fly   277 YILVLEYVGPKYRTFVANMSIAIF--FTGAACLLPWIAYFLADWKLLAIVTSAPLLLAIFTPFVV 339
            :....|.:.|..|     :.|..|  :..|..:...:||...:||....:.:|...|::.....:
 Worm   173 WTYATEMISPNRR-----LRILAFSNWPNARMIQVGLAYISQEWKTATYICAAVSCLSLPILIYL 232

  Fly   340 PESARWLVSQGKVDKAVGILKKLEKGNGRQVPPQTYQIFTDSCKRMQEQEAQNGKYSVLDLFKSP 404
            |||..||..:.|...|....|:|.|         ..:.:::.    ......|.|::...:.|.|
 Worm   233 PESPIWLDQKQKYKNASKARKRLRK---------IGKFYSNE----HSTVVANRKFTPTRILKDP 284

  Fly   405 RLRRTTLLLIVIWMAISLVFDGHVRNVGSLGLDIFFTFTLACFTEL-PADTLLTVILDRFGRRWL 468
            :||.:..::|.::..:              ||.::       .|:| .||....:.|.:|     
 Worm   285 KLRNSFFMIIFMYFYV--------------GLAVY-------ITDLNGADMTKNLYLGQF----- 323

  Fly   469 ACSSMVLSGVFSLLATVVP--VGIYSAALAIMGRFFVNISY-----NIGLQW------------- 513
             .|.:|||....::....|  .|:....|.::.:|...:.|     .:.|.|             
 Worm   324 -LSGLVLSIAQFIIGMTEPYLTGLGRRVLFLIAQFIAMLCYICILICLYLNWKGSFLYLSAYTLA 387

  Fly   514 --------------AAEVLPTVVRAQAVAFIHIMGYVASIIA 541
                          ..|::||.|||.|.:..:|...:.:|:|
 Worm   388 YATQSLCLEAAYLSLVELMPTDVRATAGSTANICMKIGTILA 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 97/497 (20%)
MFS 206..545 CDD:119392 75/373 (20%)
suex-2NP_501556.2 MFS 108..460 CDD:391944 75/367 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.