DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42269 and svop-1

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_498960.2 Gene:svop-1 / 176250 WormBaseID:WBGene00014021 Length:520 Species:Caenorhabditis elegans


Alignment Length:433 Identity:98/433 - (22%)
Similarity:177/433 - (40%) Gaps:60/433 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 PQVKCRHGWSYNFTEIPYATVATEQNWVCDDAALPTYAQSIFFLGAIVGGLLFGWVADRFGRIPA 234
            |.:.|..|    .:.:..|.|.|     |            .|.|.::....:|.:.|||||...
 Worm   108 PALACEWG----ISSVQQALVTT-----C------------VFSGMMLSSTFWGKICDRFGRRKG 151

  Fly   235 LIGTNMMGLLAGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLEYVGPKYRTFVANMSIAI 299
            |..:.::..:.||.:....:|:.....|...||.... ......|..|:: |..:.....:.|..
 Worm   152 LTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGG-VPQSVTLYAEFL-PTAQRAKCVVLIES 214

  Fly   300 FFTGAACLLPWIAYFLAD---WKLLAIVTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVGILKK 361
            |:...|.....:|||:.:   |:.|..::|.||.:.....|.:|||||:.::.|..::|:..|:.
 Worm   215 FWAIGAVFEALLAYFVMESFGWRALMFLSSLPLGIFAVASFWLPESARFDMASGHPERALETLQA 279

  Fly   362 LEKGNGRQVPPQTYQIFTDSCKRMQEQEAQNGKYSVLDLFKSPRLRRTTLLLIVIW--------- 417
            ..:.|..|:|  |.::.:.:      :.....:..:.:|. ||.||:||:||..||         
 Worm   280 AARMNRVQLP--TGRLVSST------KAGSESRGDIANLL-SPDLRKTTILLWCIWAITAFSYYG 335

  Fly   418 --MAISLVFDGHVRNVGSL---GLDI----------FFTFTLACFTELPADTLLTVILDRFGRRW 467
              :..:::|..|....|.|   |..:          :|........|.|...:..:|::.|||:.
 Worm   336 MVLFTTVLFQSHDECHGGLFSNGTQMEVCQPLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRKK 400

  Fly   468 LACSSMVLSGVFSLLATVVPVGIYSAALAIMGRFFVNISYNIGLQWAAEVLPTVVRAQAVAFIHI 532
            .......:..:|:.|............|..:.|.|::.::.....:..||.||.:||..:.....
 Worm   401 TMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSA 465

  Fly   533 MGYVASIIAPFVVYLAN-ISQALPLIILGILGIIGGLLALLLP 574
            |..:.:|:.||:..:|: .|.:||:.|.|...|:|.:.:|.||
 Worm   466 MARIGAIVTPFIAQVASEKSLSLPIGIYGTAAILGLIASLSLP 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 88/409 (22%)
MFS 206..545 CDD:119392 80/365 (22%)
svop-1NP_498960.2 2A0119 16..514 CDD:273328 98/433 (23%)
MFS 87..508 CDD:119392 96/431 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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