DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42269 and oct-1

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_492617.4 Gene:oct-1 / 172841 WormBaseID:WBGene00003842 Length:585 Species:Caenorhabditis elegans


Alignment Length:546 Identity:180/546 - (32%)
Similarity:285/546 - (52%) Gaps:34/546 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SDSLPPSMDFDDILPLIGEFGRYQKLLF--ICMIPFSFFVAFVYFSQIFLTLIPEQHWCHVPELD 125
            |.:.||  |||.:|..:|.:|.||.:.|  || :|.|...||..|:..|:...| .|.||:||  
 Worm    19 SATKPP--DFDFVLEQVGNYGTYQIVFFFIIC-LPTSLPSAFSAFNIPFVVGNP-PHTCHIPE-- 77

  Fly   126 GLDVEARLALSIPMTNG-EYNNCYMYDVNYTDILAQGKVMADP------KWPQVKCRHGWSY-NF 182
            |.:...      |:||. :..:|..|  |.|.|.......:.|      :...|.|::||.| |.
 Worm    78 GKEYLR------PLTNDTQILSCKQY--NETQINVFRAFTSAPVDTYSDRISLVPCQNGWDYDNS 134

  Fly   183 TEIPYATVATEQNWVCDDAALPTYAQSIFFLGAIVGGLLFGWVADRFGRIPALIGTNMMGLLAGV 247
            |.:.  ::.||.|.|||..|....:.:.|::|:.:|..|||:|||:|||..:......:.::.|.
 Worm   135 TYLD--SLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGT 197

  Fly   248 GTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLEYVGPKYRTFVANMSIAIFFTGAACLLPWIA 312
            .::|..:...|.|:|||.|.||...|.:.:|:.:|::|...|.| :.:..::||..|..||..:|
 Worm   198 ASSFAKDIESFIILRFFTGLAFPALFQIPFIICMEFMGNSGRIF-SGLMTSLFFGAAMALLGVVA 261

  Fly   313 YFLADWKLLAIVTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVGILKKLEKGNGRQVPPQTYQI 377
            .|:..|:.|....:||....|...|.:|||.||.||.||...|...|||:.|.||:.  ......
 Worm   262 MFIRRWRQLTFFCNAPFAFYIIYYFFLPESPRWSVSVGKWADAKKQLKKIAKMNGKS--NVDVDE 324

  Fly   378 FTDSCKRMQ---EQEAQNGKYSVLDLFKSPRLRRTTLLLIVIWMAISLVFDGHVRNVGSLGLDIF 439
            ..||.|..|   |::.....::|.||||:|.|||.||::..||:..:::::|...||.:|.:|.:
 Worm   325 LVDSMKNHQNAAEEKETKRSHNVTDLFKTPNLRRKTLIVTYIWVMNAIIYNGLTLNVSNLPVDDY 389

  Fly   440 FTFTLACFTELPADTLLTVILDRFGRRWLACSSMVLSGVFSLLATVVPVGI--YSAALAIMGRFF 502
            ::|.:....|||...::..:|...||||...::|::.|:..:.|..:|.|.  ..|:.:.:|:|.
 Worm   390 WSFIINGAVELPGYFVVWPLLQCAGRRWTLAATMIVCGIGCVSAMFMPDGYPWLVASASFIGKFG 454

  Fly   503 VNISYNIGLQWAAEVLPTVVRAQAVAFIHIMGYVASIIAPFVVYLANISQALPLIILGILGIIGG 567
            |...:.:...:|.|:.||||||..:....::.....::||.:|.|..|.:.|||:|:|::.:..|
 Worm   455 VGSGFAVIYIFAGELYPTVVRAIGMGMSSMVAGSGLLLAPHIVNLGKIVKILPLLIMGLMALSAG 519

  Fly   568 LLALLLPETLNHVLPQTLSDGEEFGR 593
            :|...|||||...||.|:.|.|.||:
 Worm   520 ILTFFLPETLGAPLPMTIEDAENFGK 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 154/486 (32%)
MFS 206..545 CDD:119392 108/343 (31%)
oct-1NP_492617.4 2A0119 34..536 CDD:273328 168/518 (32%)
MFS 134..526 CDD:119392 126/396 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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