DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42269 and str-176

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001294210.1 Gene:str-176 / 13197055 WormBaseID:WBGene00006220 Length:540 Species:Caenorhabditis elegans


Alignment Length:444 Identity:103/444 - (23%)
Similarity:210/444 - (47%) Gaps:60/444 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 CRHGWSYNFTEIPYATVATEQNWVCDDAALPTYAQSIFFLGAIVGGLLFGWVADRFGRIPA-LIG 237
            |.....|.|     .:|..|.|::|:||.......::...|.:||..:||.|:|.|||..| ||.
 Worm   114 CEPDLRYQF-----KSVQVEFNYICEDAKKVKNTITVQTFGVLVGAAIFGQVSDTFGRRKALLIS 173

  Fly   238 TNMMGLLAGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLEYVGPKYRTFVANMSIAIFFT 302
            |...||...: ||:..:.:.|.:.|...|........:..:.::|.:..|.|.::.|   :|.::
 Worm   174 TLGNGLFNWI-TAYSPDLFYFMVWRTLAGVFTGGVTVVQMVFMVENIPRKDRMWIQN---SITWS 234

  Fly   303 GAACLLPWIAYFLADWKLLAIVTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVGILKKLEKGNG 367
            ....|.|::|:...||:.:::|.:|..:.......::.||.|||:.:|::::|...|.::.|.: 
 Worm   235 PNLILFPFVAWLCQDWRTMSVVIAASSIATFLACLILEESPRWLIQKGRIEEARKSLIRIRKTD- 298

  Fly   368 RQVPPQTYQIFTDSCKRMQ-EQEAQNG----KYSVLDLFKSPRLRRTTLLLI-----VIWMAISL 422
             ::..:|::...|....:: |:.|::.    ||:.:.||.:.::...:|..|     ..::..||
 Worm   299 -KLYDETFEKQLDEVLHVEAEKHARSSKKAKKYTFIHLFCTWKMIAQSLTFITGITCTTFIVYSL 362

  Fly   423 VFDGHVRNVGSLGLDIFFTFTLACFTELPADTLLTVI---LDRFGRRWLACSSMVLSGVFSLLAT 484
            ::     |:..|...:::...:...:....:..:::.   |..|||:.:...:|:.: :|:||  
 Worm   363 MY-----NMEKLSGSLYWNLAIMGASRWIINIAVSIADYKLPWFGRKMINQIAMICT-LFALL-- 419

  Fly   485 VVPVGIY------------SAALAIMGRFFVNISYNIGLQWAAEVLPTVVRAQAVAFIHIMGYVA 537
            ::.|.:|            .||:::..:.|: ..|    ....|:.||.||..||:.:..|..:.
 Worm   420 MIAVYLYFGYNGQLIAIGTVAAVSMCSQLFI-AKY----MMVNELYPTAVRNLAVSAVSTMSRIG 479

  Fly   538 SIIAPFVVYLANISQALPLIIL---GILGIIGGLLALLLPETL-----NHVLPQ 583
            |:.:|.:.||::.::.:|..:|   .:...|  :|:|.||||.     ||:.|:
 Worm   480 SMFSPQLFYLSDYAEWIPYAVLFSCQLYDFI--VLSLFLPETKGVILENHLPPK 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 91/403 (23%)
MFS 206..545 CDD:119392 80/364 (22%)
str-176NP_001294210.1 2A0119 13..527 CDD:273328 100/438 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162935
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.940

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