DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42269 and sv2b

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_002933355.1 Gene:sv2b / 100497731 XenbaseID:XB-GENE-6041859 Length:711 Species:Xenopus tropicalis


Alignment Length:619 Identity:121/619 - (19%)
Similarity:200/619 - (32%) Gaps:247/619 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 KCRHG---WSYNFTEIPYATVATEQNWVCDDAALPTYAQS-------------IFFLGAIVGGLL 221
            :|.||   |:. |..:..|.:|...........||:..:.             |.:||.::|..:
 Frog   129 ECGHGRFQWTL-FVVLGLALMADGVEVFVVGFVLPSAEKDMCLSRSNKGMLGLIVYLGMMLGAFV 192

  Fly   222 FGWVADRFGRIPALIGTNMMGLLAGVGTAFVSNFWE----FAIMRFFVGFAFDNCFTMMYILVLE 282
            :|.:||:.||...||    :.|......:|||:|.:    |...|...||.......:::....|
 Frog   193 WGGLADKVGRKKCLI----ISLTINAAFSFVSSFVQGYGLFLFCRLISGFGIGGSLPIVFAYFSE 253

  Fly   283 YVGPKYRTFVANMSIAIFFTGA--ACLLPW-------------IAYFLADWKLLAIVTSAPLLLA 332
            ::..:.|....:.....:..||  |..:.|             ..|....|::..::...|.:.:
 Frog   254 FLAREKRGEHLSWLCMFWMIGAVYAAAMAWSIIPHYGWGFSMGTHYHFHSWRVFVVICVLPCIAS 318

  Fly   333 IFTPFVVPESARWLVSQGKVDKAVGILKKLEKGNGRQVPPQTYQIFTDSCKRMQEQ-------EA 390
            |.....:|||.|:|:..||.|:|..|||.:...|.| ...:..::||.|..:..:|       ::
 Frog   319 IIALKFMPESPRFLLETGKHDEAWMILKNIHDTNMR-AKGEPEKVFTVSHIKTPKQPDEFIEIQS 382

  Fly   391 QNGKY-----------------SVLDLFKSPRLRRTTLLLIVIWMAISLVF-------------- 424
            ..|.:                 ::|..| |.:.|:.|:.|.|:|..:||.:              
 Frog   383 STGTWFQRWFVRIMTVIKQIWENMLHCF-SGQFRKNTIFLAVVWFTMSLSYYGLTVWFPDTIRYL 446

  Fly   425 -------------DGHVRNVGSLGLDIFFTFTL-------------------------------A 445
                         |.:|:|..       |.|||                               .
 Frog   447 QDEDYASKVKRFTDENVKNFN-------FNFTLENQIHEDGEYYNDRFYKMKLKYVTFKDSLFDE 504

  Fly   446 CFTE------------------------------------------------------------- 449
            |:.|                                                             
 Frog   505 CYFEDVTSTGSIFENCTIQNTVFYNTDLYQHKFIDCNFINVTFSQPKEGCHIDFEEDNDFLIYLV 569

  Fly   450 --------LPADTLLTVILDRFGRRWLACSSMVLSGV--FSLLATVVPVGIYSAALAIMGRFFVN 504
                    ||.:.:..:::|:.||..:...||::|.|  |.|                   ||.|
 Frog   570 SFLGSLSVLPGNIISALLMDKIGRIRMIAGSMLISAVCCFFL-------------------FFGN 615

  Fly   505 I-SYNIGLQ----------WAA------EVLPTVVRAQAVAFIHIMGYVA-----SIIAPFVVYL 547
            . |..||.|          |.|      |:.||..||.|...::.:..:|     ||.|.||   
 Frog   616 SESAMIGWQCLFCGTSIAAWNALDVVTVELYPTNKRATAFGILNGLCKLAAIFGNSIFASFV--- 677

  Fly   548 ANISQALPLIILGILGIIGGLLALLLPETLNHVL 581
             .|::.:|:::.....:.|||::|.||||...||
 Frog   678 -GITKVIPILLASTALVGGGLISLRLPETRELVL 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 110/588 (19%)
MFS 206..545 CDD:119392 99/545 (18%)
sv2bXP_002933355.1 synapt_SV2 1..711 CDD:130366 121/619 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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