DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42269 and slc22a6

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_002937540.1 Gene:slc22a6 / 100487511 XenbaseID:XB-GENE-5842250 Length:552 Species:Xenopus tropicalis


Alignment Length:536 Identity:155/536 - (28%)
Similarity:258/536 - (48%) Gaps:17/536 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 MDFDDILPLIGEFGRYQKLLFICMIPFSFFVAFVYFSQIFLTLIPEQHWCHVPELDGLDVEAR-- 132
            |.|.:||..||..||||.:..:.:....|.:|.....|.|...|| :|.|   :::|...|..  
 Frog     1 MAFQEILESIGGMGRYQVIHVVLLSLPVFMLASHNLMQNFTAAIP-RHRC---QINGSFEETNFT 61

  Fly   133 ---LALSIPM-TNGEYNNCYMYDVNYTDILAQGKVMADPKWPQVKCRHGWSYNFTEIPYATVATE 193
               |...:|| ..||::.|..|......:|.........:.....|..||.|:.:|.. :|:.|:
 Frog    62 GPWLRALVPMKPTGEFSKCLRYTTPQYHLLMDNFTQNVDELETETCVDGWVYDHSEFA-STIITQ 125

  Fly   194 QNWVCDDAALPTYAQSIFFLGAIVGGLLFGWVADRFGRIPALIGTNMMGLLAGVGTAFVSNFWEF 258
            .:.||:...:...||||:..|.:||.::||.::|:|||.|..|.:|:...:.|:..||..|:..:
 Frog   126 WDLVCNHRRMRQVAQSIYMAGVLVGSVVFGGLSDKFGRRPLNIWSNLQMSVTGICAAFSPNYIWY 190

  Fly   259 AIMRFFVGFAFDNCFTMMYILVLEYVGPKYRTFVANMSIAIFFTGAACLLPWIAYFLADWKLLAI 323
            .|.||..|.|........|.|::|::....|.|.:. :....:|....:|..:|:.:.||..|.:
 Frog   191 CIFRFLTGTALSGIVLNSYSLIVEWIPTGNRAFTST-ATGYCYTMGQLVLVGLAFMIRDWHWLQL 254

  Fly   324 VTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVGILKKLEKGNGRQVPPQ--TYQIFTDSCKRMQ 386
            ..|.|........:.:|||.||||..||.:.|...|||:.|.||::...:  |.::...|.:| :
 Frog   255 AASLPFFFYFLYSWWIPESGRWLVLSGKPEVACKALKKVAKINGKKEAGEKLTVEVLKSSMQR-E 318

  Fly   387 EQEAQNGKYSVLDLFKSPRLRRTTLLLIVIWMAISLVFDGHVRNVGSLGLDIFFTFTLACFTELP 451
            ...:::..||||||.::|.:||.:..:...|.:.|..:.|...::.|.|:.|:....:....::|
 Frog   319 ISASKHSTYSVLDLVRTPVVRRISFCISCTWFSTSFAYYGLALDLQSFGVSIYIIQIIFGTVDIP 383

  Fly   452 ADTLLTVILDRFGRRWLACSSMVLSGVFSLLATVVPVGIYS--AALAIMGRFFVNISYNIGLQWA 514
            |......::...|||.|...:::|:|:..|:...||....:  .::|:.|:..:..|:|....:.
 Frog   384 AKFFSYFVMTYIGRRVLQALTLILAGIAILVNICVPQDYQTVRTSMAVFGKGCLAASFNCLFLYT 448

  Fly   515 AEVLPTVVRAQAVAFIHIMGYVASIIAPFVVYLANISQALPLIILGILGIIGGLLALLLPETLNH 579
            .|:.|||:|...:....:|..:..||||......:|..:|||||.|.|.|:.|:....|||||..
 Frog   449 GELYPTVIRQSGMGLGTMMARLGGIIAPLAQMTGDIYHSLPLIIFGCLPILSGIAGCFLPETLGV 513

  Fly   580 VLPQTLSDGEEFGRGQ 595
            .||:|:.|.|...:.|
 Frog   514 PLPETIEDVESSDKKQ 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 130/481 (27%)
MFS 206..545 CDD:119392 97/342 (28%)
slc22a6XP_002937540.1 MFS_SLC22A6_OAT1_like 102..508 CDD:341004 116/408 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.100

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