DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42269 and sv2ba

DIOPT Version :9

Sequence 1:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001076464.1 Gene:sv2ba / 100009626 ZFINID:ZDB-GENE-070209-134 Length:689 Species:Danio rerio


Alignment Length:601 Identity:113/601 - (18%)
Similarity:201/601 - (33%) Gaps:211/601 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 CRHG---WSYNFTEIPYATVATEQNWVCDDAALPTYAQS-------------IFFLGAIVGGLLF 222
            |.||   |:. ||.:..|.:|..........|||:..:.             |.::|.::|.:::
Zfish   106 CGHGRFQWTL-FTLLGLALMADGVECFVVSFALPSAEKDMCLSNADKGMLGLIVYVGMMIGAVVW 169

  Fly   223 GWVADRFGRIPALIGTNMMGLLAGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLEY---- 283
            |.:||:.||...|:....:..:....:.|...:..|...|...|........::|....|:    
Zfish   170 GGLADKLGRKQCLLYALAINCIFSFLSCFAQGYGFFIFFRLCSGIGIGGSIPVVYTYYAEFLQMD 234

  Fly   284 --------------VGPKYRTFVANMSIAIFFTGAACLLPWIAYFLADWKLLAIVTSAPLLLAIF 334
                          :|..|.:|.|...|..:..|.:.   ...:....|::..:|...|.:.|:.
Zfish   235 KRGEHLSWLCLFWMLGGLYASFTAWGIIPHYGWGFSM---GTEFQFHSWRVFVLVCFLPSVAALA 296

  Fly   335 TPFVVPESARWLVSQGKVDKAVGILKKLEKGN--GRQVPPQTYQIFTDSCKRMQEQE-----AQN 392
            ....:|||.|:|:...:.|:|..||:::...|  .:..|.:.:|:......:.|:.|     ::.
Zfish   297 GLVFMPESPRFLLESARHDEAWMILRRVHDTNWGAKGEPERVFQVSQIKTPQTQDDEFIEIQSET 361

  Fly   393 G----KYSV--LDLFK----------SPRLRRTTLLLIVIW--MAIS--------------LVFD 425
            |    ::.|  :.|.|          :|.:|...|.:.::|  ||.|              |.|:
Zfish   362 GTAFQRFMVRQMTLVKQVMKNMLSLAAPDVRLHGLFIAIVWFTMAFSYYGLGTWFPDQIKYLQFE 426

  Fly   426 GHVRNVGSLGLDIF---------FTFTLA-------------------------------CFTE- 449
            .:..||     .||         |.|||.                               |:.| 
Zfish   427 EYESNV-----KIFHRERVERFHFNFTLQNQLHKEGEYVHDRFINIEIRNVKFEDSLFENCYFED 486

  Fly   450 ----------------------------------------------------------------- 449
                                                                             
Zfish   487 IKSTETFFENCTLKNTVFYNTDLWEDSKFINCNLENTTFLHPKKGCHLNFQEENDILIYLDSFLG 551

  Fly   450 ----LPADTLLTVILDRFGRRWLACSSMVLSGV--------FSLLATVVPVGIYSAALAIMGRFF 502
                :|.:.|..:::|:.||..:...||:.|.|        ||..|.|:...::.||.|      
Zfish   552 SLSVIPGNILAGLLMDKIGRLKIIGGSMLGSAVCTFFLLLCFSQWAVVLFQCLFFAAGA------ 610

  Fly   503 VNISYNIGLQ-WAAEVLPTVVRAQAVAFIHIMGYVASIIAPFVV-YLANISQALPLIILGILGII 565
              .::| |:: ...|:.|...||.|...::....:|:||:.|:. ....|::.:|:|:.....:.
Zfish   611 --AAWN-GIEVVTVELYPASKRATAFGVLNGTCKLAAIISSFIFGKFIGITKIIPIILSFSALVC 672

  Fly   566 GGLLALLLPETLNHVL 581
            |||||..||||...:|
Zfish   673 GGLLAFKLPETREVIL 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42269NP_648019.2 2A0119 80..552 CDD:273328 101/570 (18%)
MFS 206..545 CDD:119392 89/527 (17%)
sv2baNP_001076464.1 synapt_SV2 36..689 CDD:130366 113/601 (19%)
MFS 116..678 CDD:119392 103/578 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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