DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10472 and Tmprss11b

DIOPT Version :10

Sequence 1:NP_648017.1 Gene:CG10472 / 38688 FlyBaseID:FBgn0035670 Length:290 Species:Drosophila melanogaster
Sequence 2:XP_063129516.1 Gene:Tmprss11b / 365265 RGDID:1303278 Length:420 Species:Rattus norvegicus


Alignment Length:298 Identity:87/298 - (29%)
Similarity:138/298 - (46%) Gaps:54/298 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GAQAVDWNSVKNLNIETPMPKVHGETLPSG-------------RITGGQIAEPNQFPYQVGLLLY 67
            |:...|..|:|    .|.:.||..|.:.:.             |||||..|:..::|:|..|.: 
  Rat   149 GSLTTDPGSLK----LTEITKVDAEKIINNRCGRRPRMSATYDRITGGSTAQKGEWPWQASLRV- 208

  Fly    68 ITGGAAWCGGTIISDRWIITAAHC----------TDSLTTGVDVYLGAHDRTNAKEEGQQIIFVE 122
              .|...||.::|.:|:::|||||          |.|..|.|......|             :||
  Rat   209 --NGKHHCGASLIGERFLLTAAHCFLRTNNPKNLTVSFGTRVTPAYMQH-------------YVE 258

  Fly   123 TKNVIVHEDWIAETITNDISLIKLPVPIEFNKYIQPAKLPVKSDSYSTYGGENAIASGWGKISDS 187
              .||:|||::.....:|:::|||...:.|...:....||..:..:..  ||..:.:|||.:|.:
  Rat   259 --EVIIHEDYVKGQHHDDVAIIKLTEKVSFRNDVHRVCLPEATQVFPP--GEGVVVTGWGSLSYN 319

  Fly   188 ATGATDILQYATVPIMNNSGCS--PWYFGLVAASNICI-KTTGGISTCNGDSGGPLVLDDGSNT- 248
            ..... :||.|::.|::.:.|:  ..|.|.:..:.:|. ...|.:..|.||||||||..:..:. 
  Rat   320 GKSPL-LLQKASIKIIDTNACNSEEAYGGRIMDTMLCAGYMEGYVDACQGDSGGPLVHPNSRDIW 383

  Fly   249 -LIGATSFGIALGCEVGWPGVFTRITYYLDWIEEKSGV 285
             |:|..|:|...| .|..|||:.|:|.|.|||..|:|:
  Rat   384 YLVGIVSWGHECG-RVNKPGVYMRVTSYRDWIASKTGI 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10472NP_648017.1 Tryp_SPc 46..279 CDD:214473 75/247 (30%)
Tmprss11bXP_063129516.1 None

Return to query results.
Submit another query.