DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10472 and Klk1c12

DIOPT Version :10

Sequence 1:NP_648017.1 Gene:CG10472 / 38688 FlyBaseID:FBgn0035670 Length:290 Species:Drosophila melanogaster
Sequence 2:XP_017444409.1 Gene:Klk1c12 / 292855 RGDID:1303192 Length:262 Species:Rattus norvegicus


Alignment Length:260 Identity:78/260 - (30%)
Similarity:113/260 - (43%) Gaps:37/260 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ETLPSG--RITGGQIAEPNQFPYQVGLL-LYITGGAAWCGGTIISDRWIITAAHCTDSLTTGVDV 101
            :..|.|  |:.||...|.|..|:||.:: .|:      |||.:|...|:||||||.....:...|
  Rat    16 DAAPPGQSRVVGGYKCEKNSQPWQVAVINRYL------CGGVLIDPSWVITAAHCYSHALSNYHV 74

  Fly   102 YLGAHDRTNA-KEEG-QQIIFVE------------TKNVIVHEDWIAETITNDISLIKLPVPIEF 152
            .||   |.|. |:|. .|..||.            .||   |..:..:..:||:.|:.|..|.:.
  Rat    75 LLG---RNNLFKDEPFAQYRFVNQSFPHPDYNPFFMKN---HTLFPGDDHSNDLMLLHLSEPADI 133

  Fly   153 NKYIQPAKLPVKSDSYSTYGGENAIASGWGKISDSATGATDILQYATVPIMNNSGCSPWYFGLVA 217
            ...::...||.:....    |...:||||...........|.||...:.|::|..|...:..:|.
  Rat   134 TDGVKVIDLPTEEPKV----GSTCLASGWSSTKPLEWEFPDDLQCVNINILSNEKCIKAHTQMVT 194

  Fly   218 ASNICI-KTTGGISTCNGDSGGPLVLDDGSNTLIGATSFGIALGCEVGWPGVFTRITYYLDWIEE 281
            ...:|. :..||..||||||||||:.|   ..|.|.||:......|...|.::|::..:..||:|
  Rat   195 DVMLCAGELEGGKDTCNGDSGGPLLCD---GVLQGITSWSSVPCGETNRPAIYTKLIKFTSWIKE 256

  Fly   282  281
              Rat   257  256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10472NP_648017.1 Tryp_SPc 46..279 CDD:214473 73/248 (29%)
Klk1c12XP_017444409.1 Tryp_SPc 25..257 CDD:238113 75/251 (30%)

Return to query results.
Submit another query.