DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10472 and Tmprss5

DIOPT Version :10

Sequence 1:NP_648017.1 Gene:CG10472 / 38688 FlyBaseID:FBgn0035670 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_695223.2 Gene:Tmprss5 / 266681 RGDID:628625 Length:445 Species:Rattus norvegicus


Alignment Length:251 Identity:77/251 - (30%)
Similarity:118/251 - (47%) Gaps:28/251 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SGRITGGQIAEPNQFPYQVGLLLYITGGAAWCGGTIISDRWIITAAHCTDSLTTG------VDVY 102
            :.||.|||.....::|:|..::|   |....||.::::..|::|||||..|....      |...
  Rat   205 ASRIVGGQAVASGRWPWQASVML---GSRHTCGASVLAPYWVVTAAHCMYSFRLSRLSSWRVHAG 266

  Fly   103 LGAHDRTNAKEEGQQIIFVETKNVIVHEDWIAETITNDISLIKLPVPIEFNKYIQPAKLPVKSDS 167
            |.:|.... :.:|..:     :.:|.|..:.|:....|::|::|..||.|:..:....||.|...
  Rat   267 LVSHSAVR-QHQGTMV-----EKIIPHPLYSAQNHDYDVALLQLRTPINFSDTVSAVCLPAKEQH 325

  Fly   168 YSTYGGENAIASGWGKISDSATGATDILQYATVPIMN----NSGCSPWYFGLVAASNICI-KTTG 227
            :..  |.....||||....|.|.::|.||...||:::    ||.|  .|.|.:....:|. ...|
  Rat   326 FPQ--GSQCWVSGWGHTDPSHTHSSDTLQDTMVPLLSTDLCNSSC--MYSGALTHRMLCAGYLDG 386

  Fly   228 GISTCNGDSGGPLVLDDGSN-TLIGATSFGIALGC-EVGWPGVFTRITYYLDWIEE 281
            ....|.||||||||...|.. .|:|..|:|  .|| |...|||:.::..:||||.:
  Rat   387 RADACQGDSGGPLVCPSGDTWHLVGVVSWG--RGCAEPNRPGVYAKVAEFLDWIHD 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10472NP_648017.1 Tryp_SPc 46..279 CDD:214473 75/245 (31%)
Tmprss5NP_695223.2 SRCR_2 106..203 CDD:464747
Tryp_SPc 208..441 CDD:238113 76/248 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.