DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10472 and svh-1

DIOPT Version :10

Sequence 1:NP_648017.1 Gene:CG10472 / 38688 FlyBaseID:FBgn0035670 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:258 Identity:84/258 - (32%)
Similarity:124/258 - (48%) Gaps:38/258 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RITGGQIAEPNQFPYQVGLLLYITGGAAWCGGTIISDRWIITAAHC--TDSLTTGVDVYLGAHDR 108
            |:.||....|..||:...|....| .|..||.:|:....:||||||  .|...:..:|.:|..| 
 Worm   712 RVVGGFETVPGAFPWTAALRNKAT-KAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWD- 774

  Fly   109 TNAKEEGQQIIFVET-------KNVIVHEDWIAETITNDISLIKLPVP-IEFNKYIQPAKLPVKS 165
            .|..:..:||.:::.       |::..|          ||:::::|.| ||||:|.||..||.|.
 Worm   775 NNQTDGNEQIFYLQRIHFYPLYKDIFSH----------DIAILEIPYPGIEFNEYAQPICLPSKD 829

  Fly   166 DSYSTYGGENAIASGWGKISDSATGATDILQYATVPIMNNSGC--SPWYFGLVAASNICI-KTTG 227
            ..|:.  |...:.||||.:   .....:.||.|.:||:|...|  |...:..::.|..|. ...|
 Worm   830 FVYTP--GRQCVVSGWGSM---GLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEG 889

  Fly   228 GISTCNGDSGGPLVL--DDGSNTLIGATSFGIALGC-EVGWPGVFTRITYYLDWIEEKSGVVN 287
            ||.:|.||||||...  :||:..|.|..|:|.  || :...||::|.:..||.||   |.::|
 Worm   890 GIDSCQGDSGGPFACRREDGAFVLAGVISWGD--GCAQKKQPGIYTMVAPYLSWI---SAIIN 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10472NP_648017.1 Tryp_SPc 46..279 CDD:214473 80/248 (32%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 82/253 (32%)
Blue background indicates that the domain is not in the aligned region.

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