DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10472 and svh-1

DIOPT Version :9

Sequence 1:NP_648017.1 Gene:CG10472 / 38688 FlyBaseID:FBgn0035670 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:258 Identity:84/258 - (32%)
Similarity:124/258 - (48%) Gaps:38/258 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RITGGQIAEPNQFPYQVGLLLYITGGAAWCGGTIISDRWIITAAHC--TDSLTTGVDVYLGAHDR 108
            |:.||....|..||:...|....| .|..||.:|:....:||||||  .|...:..:|.:|..| 
 Worm   712 RVVGGFETVPGAFPWTAALRNKAT-KAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWD- 774

  Fly   109 TNAKEEGQQIIFVET-------KNVIVHEDWIAETITNDISLIKLPVP-IEFNKYIQPAKLPVKS 165
            .|..:..:||.:::.       |::..|          ||:::::|.| ||||:|.||..||.|.
 Worm   775 NNQTDGNEQIFYLQRIHFYPLYKDIFSH----------DIAILEIPYPGIEFNEYAQPICLPSKD 829

  Fly   166 DSYSTYGGENAIASGWGKISDSATGATDILQYATVPIMNNSGC--SPWYFGLVAASNICI-KTTG 227
            ..|:.  |...:.||||.:   .....:.||.|.:||:|...|  |...:..::.|..|. ...|
 Worm   830 FVYTP--GRQCVVSGWGSM---GLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEG 889

  Fly   228 GISTCNGDSGGPLVL--DDGSNTLIGATSFGIALGC-EVGWPGVFTRITYYLDWIEEKSGVVN 287
            ||.:|.||||||...  :||:..|.|..|:|.  || :...||::|.:..||.||   |.::|
 Worm   890 GIDSCQGDSGGPFACRREDGAFVLAGVISWGD--GCAQKKQPGIYTMVAPYLSWI---SAIIN 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10472NP_648017.1 Tryp_SPc 46..279 CDD:214473 80/248 (32%)
Tryp_SPc 47..282 CDD:238113 81/250 (32%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 82/253 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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