DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10472 and Gzmc

DIOPT Version :10

Sequence 1:NP_648017.1 Gene:CG10472 / 38688 FlyBaseID:FBgn0035670 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_599159.1 Gene:Gzmc / 171290 RGDID:620019 Length:248 Species:Rattus norvegicus


Alignment Length:282 Identity:85/282 - (30%)
Similarity:125/282 - (44%) Gaps:50/282 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VLLLATI---LGAQAVDWNSVKNLNIETPMPKVHGETLPSGRITGGQIAEPNQFPYQVGL-LLYI 68
            ||:|.|:   |||:|.:                         |.||....|:..||.... .|..
  Rat     4 VLILLTLLLPLGARAEE-------------------------IIGGNEVSPHSRPYMAYFEFLND 43

  Fly    69 TGGAAWCGGTIISDRWIITAAHCTDSLTTGVDVYLGAHDRTNAKEEGQQIIFVETKNVIVHEDWI 133
            .|...:|||.::.|.:::|||||.....|   |.||||: ..|||:.||||.|  .|...|..:.
  Rat    44 NGKKTFCGGFLVRDNFVLTAAHCRGRSMT---VTLGAHN-IKAKEKTQQIIPV--ANATPHPAYN 102

  Fly   134 AETITNDISLIKLPVPIEFNKYIQPAKLPVKSDSYSTYGGENAIASGWGKISDSATGATDILQYA 198
            .:..:|||.|:||....:....::|..||.::.....  |:....:|||||:.... ..:.|:..
  Rat   103 PDKRSNDIMLLKLVRSAKRTSAVRPLNLPRRNAHVKP--GDVCYMAGWGKITPQGE-FPNTLREV 164

  Fly   199 TVPIMNNSGC-SPWYFGLVAASNICI---KTTGGISTCNGDSGGPLVLDDGSNTLIGATSFGIAL 259
            .:.:..:..| |.:....:.||.||:   ||.|  ::...|||||||.   .....|..|:|...
  Rat   165 ELTVQKDRVCESQFQRSYIKASEICVGDSKTKG--ASFEEDSGGPLVC---KKAAAGIVSYGKTD 224

  Fly   260 GCEVGWPGVFTRITYYLDWIEE 281
            |..   |.||||:..:|.||::
  Rat   225 GSA---PQVFTRVLSFLSWIKK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10472NP_648017.1 Tryp_SPc 46..279 CDD:214473 75/237 (32%)
GzmcNP_599159.1 Tryp_SPc 21..244 CDD:238113 77/240 (32%)

Return to query results.
Submit another query.