DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10472 and LOC108648818

DIOPT Version :10

Sequence 1:NP_648017.1 Gene:CG10472 / 38688 FlyBaseID:FBgn0035670 Length:290 Species:Drosophila melanogaster
Sequence 2:XP_017952796.2 Gene:LOC108648818 / 108648818 XenbaseID:XB-GENE-29091263 Length:928 Species:Xenopus tropicalis


Alignment Length:316 Identity:98/316 - (31%)
Similarity:147/316 - (46%) Gaps:63/316 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ATVLLLATILGAQAVDWNSVKNLNIETPMPKVH--------------GETLPSG---RITGGQIA 53
            :|.|.:.|.........||.:.....|..|...              |:..||.   :|.||..|
 Frog   640 STALSITTSTAPSTTATNSSRTTTTTTITPTATRTITKTTKTDVTACGKGGPSALEDKIVGGTNA 704

  Fly    54 EPNQFPYQVGLLL-YITGGAAWCGGTIISDRWIITAAHC-----TDSLTTGVDVYLGAHDRTNAK 112
            ....:|:|..|:. |:      ||.::||:.|::|||||     .:|.|    |.||.       
 Frog   705 VLGSWPWQAALVSNYL------CGASLISNTWLVTAAHCIVTNDPNSYT----VRLGT------- 752

  Fly   113 EEGQQIIFVETKN------VIVHEDWIAETITNDISLIKLPVPIEFNKYIQPAKLPVKSDSYSTY 171
                 :.:..|.|      :|:||::.:.|:..||:|:||..|:.|..|||...||..|.|:.  
 Frog   753 -----LYWYSTINRFKLQQIIIHENYTSATMGYDIALLKLATPVTFTSYIQSVCLPEASSSFP-- 810

  Fly   172 GGENAIASGWGKISDSATGATDILQYATVPIMNNSGCSP--WYFGLVAASNICI-KTTGGISTCN 233
            ...:...:|||.:|...: .::|||.|.|.|::...||.  .|...:..|.:|. ...|.|.:|.
 Frog   811 DNSSCYITGWGTLSYGGS-VSNILQEAQVEIISTKLCSSSLMYGSTIKPSMLCAGYVNGNIDSCQ 874

  Fly   234 GDSGGPLVLDDGSNT---LIGATSFGIALGCEVGW-PGVFTRITYYLDWIEEKSGV 285
            ||||||||..:.|::   |:|..|||.  ||...: |||:.|:||..:||:||:|:
 Frog   875 GDSGGPLVYRNSSDSSWYLVGIISFGD--GCAQAYRPGVYARVTYLRNWIKEKTGI 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10472NP_648017.1 Tryp_SPc 46..279 CDD:214473 83/251 (33%)
LOC108648818XP_017952796.2 Tryp_SPc 698..925 CDD:238113 85/253 (34%)

Return to query results.
Submit another query.