DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6592 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_648016.1 Gene:CG6592 / 38687 FlyBaseID:FBgn0035669 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:318 Identity:91/318 - (28%)
Similarity:147/318 - (46%) Gaps:54/318 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SSSGSLEHDAEMSASNVDNRHIKGLGMGREMSALSEEDDREPLVLNLETTPLMEKMLPEGAMAMD 121
            ||||:|    |::.||             |:::|:::|....|.......|.:.      .::.:
  Rat   143 SSSGNL----EIAPSN-------------EITSLTDQDTENVLTQECGARPDLI------TLSEE 184

  Fly   122 RIFGGDVGNPHCFPYQVGMLLQRPKGLYWCGGSLISDKHVITAAHC---VDMAKRALVFLGANEI 183
            ||.||.......:|:||.:.|   ..::.|||:|||:..|:|||||   ....::.....|.:.|
  Rat   185 RIIGGTQAETGDWPWQVSLQL---NNVHHCGGTLISNLWVLTAAHCFRSYSNPQQWTATFGVSTI 246

  Fly   184 KNAKEKGQVRLMVPSENFQIYPTWNPKRLKDDIAIVRLPHAVSFNERIHPIQLPKRHYEYRSFKN 248
                   ..||.|.......:..:|.....:|||:|:|...|:|...||.:.||..  ......:
  Rat   247 -------SPRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPVTFTRNIHRVCLPAA--TQNIIPD 302

  Fly   249 KLAIASGWGRYATGVHAISNVLRYVQLQIIDGRTCKSNFPLSYRGT----NICTSGRN-ARSTCN 308
            .:|..:|||....|.:.::| |:..:::|:....|  |.|..|.|:    .:|...|: |...|.
  Rat   303 SVAYVTGWGSLTYGGNTVTN-LQQGEVRIVSSEVC--NEPAGYGGSVLPGMLCAGVRSGAVDACQ 364

  Fly   309 GDSGGPLVLQRRHSKKRV--LVGITSFGSIYGCD-RGYPAAFTKVASYLDWISDETGV 363
            ||||||||   :...:|:  :|||.|:|  |.|. ...|..:|:|.:|.:||..:||:
  Rat   365 GDSGGPLV---QEDTRRLWFVVGIVSWG--YQCGLPNKPGVYTRVTAYRNWIRQQTGI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6592NP_648016.1 Tryp_SPc 123..359 CDD:238113 75/246 (30%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 75/247 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.