DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6592 and grass

DIOPT Version :10

Sequence 1:NP_648016.1 Gene:CG6592 / 38687 FlyBaseID:FBgn0035669 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:235 Identity:67/235 - (28%)
Similarity:112/235 - (47%) Gaps:34/235 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 YWCGGSLISDKHVITAAHCVDMAKRAL--VFLGANEI---KNAKEKGQVRLMVPS------ENFQ 202
            :.|||::||:::::||||||...:..|  :.||.:.|   ::.:::|:.:...|.      |...
  Fly   146 FLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHL 210

  Fly   203 IYPTWNPKRLKDDIAIVRLPHAVSFNERIHPIQLP-----KRHYEYRSFKNKLAIASGWGRYATG 262
            |:..::.:.:..|||:::|..:|.|.:.|.||.||     |...|..|    ....:|||....|
  Fly   211 IHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQIS----TYFVTGWGTTENG 271

  Fly   263 VHAISNVLRYVQLQIIDGRTCKSNF----PLSYRGTNICTSGRNARSTCNGDSGGPLVLQRR--- 320
              :.|:||....:.:.....|...:    |||    .:|..|.:.:.:|.|||||||....:   
  Fly   272 --SSSDVLLQANVPLQPRSACSQAYRRAVPLS----QLCVGGGDLQDSCKGDSGGPLQAPAQYLG 330

  Fly   321 -HSKKRVLVGITSFGSIYGCDRGYPAAFTKVASYLDWISD 359
             ::.|.|..||.|.|.:.......|..:|.|..|:.||:|
  Fly   331 EYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITD 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6592NP_648016.1 Tryp_SPc 123..359 CDD:238113 66/233 (28%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 67/235 (29%)
Blue background indicates that the domain is not in the aligned region.

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