DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6592 and Cma1

DIOPT Version :10

Sequence 1:NP_648016.1 Gene:CG6592 / 38687 FlyBaseID:FBgn0035669 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_037224.1 Gene:Cma1 / 25627 RGDID:2365 Length:247 Species:Rattus norvegicus


Alignment Length:275 Identity:76/275 - (27%)
Similarity:123/275 - (44%) Gaps:51/275 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 LNLETTPLMEKMLPEGAMAMDRIFGGDVGNPHCFPYQVGM-LLQRPKGLYWCGGSLISDKHVITA 164
            :||....|:..:|.....| ..|.||....||..||...: ::.....|..|.|.||....|:||
  Rat     1 MNLHALCLLLLLLGSSTKA-GEIIGGTECIPHSRPYMAYLEIVTSDNYLSACSGFLIRRNFVLTA 64

  Fly   165 AHCVDMAKRAL-VFLGANEIKNAKEKGQVRLMVPSENFQIYPTWNPKRLKDDIAIVR-------- 220
            |||   |.|:: |.|||:. |..||....:|.|  |...|:|.::.:.:..||.:::        
  Rat    65 AHC---AGRSITVLLGAHN-KTYKEDTWQKLEV--EKQFIHPNYDKRLVLHDIMLLKLKEKAKLT 123

  Fly   221 -----LPHAVSFNERIHPIQLPKRHYEYRSFKNKLAIASGWGRYATGVH-AISNVLRYVQLQIID 279
                 ||.:.:|| .|.|              .::..|.||||  |.|: ..|:.|:.|::::.:
  Rat   124 LGVGTLPLSANFN-FIPP--------------GRMCRAVGWGR--TNVNEPASDTLQEVKMRLQE 171

  Fly   280 GRTCKSNFPLSYRGTNICTSG-RNARSTCNGDSGGPLVLQRRHSKKRVLVGITSFGSIYGCDRGY 343
            .::|| :|......:.:|... :..::...|||||||:.      ..:..||.|:   ...:...
  Rat   172 PQSCK-HFTSFQHKSQLCVGNPKKMQNVYKGDSGGPLLC------AGIAQGIASY---VHPNAKP 226

  Fly   344 PAAFTKVASYLDWIS 358
            ||.||:::.|..||:
  Rat   227 PAVFTRISHYRPWIN 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6592NP_648016.1 Tryp_SPc 123..359 CDD:238113 71/253 (28%)
Cma1NP_037224.1 Tryp_SPc 22..243 CDD:238113 71/253 (28%)

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