DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6592 and Gzmb

DIOPT Version :9

Sequence 1:NP_648016.1 Gene:CG6592 / 38687 FlyBaseID:FBgn0035669 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_038570.1 Gene:Gzmb / 14939 MGIID:109267 Length:247 Species:Mus musculus


Alignment Length:239 Identity:86/239 - (35%)
Similarity:122/239 - (51%) Gaps:23/239 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 IFGGDVGNPHCFPYQVGMLL--QRPKGLYWCGGSLISDKHVITAAHCVDMAKRALVFLGANEIKN 185
            |.||....||..||...:.:  |:|:.:  |||.||.:..|:|||||......  |.|||:.||.
Mouse    21 IIGGHEVKPHSRPYMALLSIKDQQPEAI--CGGFLIREDFVLTAAHCEGSIIN--VTLGAHNIKE 81

  Fly   186 AKEKGQVRLMVPSENFQIYPTWNPKRLKDDIAIVRLPHAVSFNERIHPIQLPKRHYEYRSFKNKL 250
            .::..||   :|......:|.:|||...:||.:::|.........:.|:.||:|:...:  ...:
Mouse    82 QEKTQQV---IPMVKCIPHPDYNPKTFSNDIMLLKLKSKAKRTRAVRPLNLPRRNVNVK--PGDV 141

  Fly   251 AIASGWGRYATGVHAISNVLRYVQLQIIDGRTCKSNFPLSYRGTN-ICTSG-RNARSTCNGDSGG 313
            ...:||||.|. :...||.|:.|:|.:...|.|:|.|...|..|| ||... :..|::..|||||
Mouse   142 CYVAGWGRMAP-MGKYSNTLQEVELTVQKDRECESYFKNRYNKTNQICAGDPKTKRASFRGDSGG 205

  Fly   314 PLVLQRRHSKKRVLVGITSFGSIYGCDRGYPAAFTKVASYLDWI 357
            |||.      |:|..||.|:|  |. |...|.|||||:|:|.||
Mouse   206 PLVC------KKVAAGIVSYG--YK-DGSPPRAFTKVSSFLSWI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6592NP_648016.1 Tryp_SPc 122..357 CDD:214473 84/237 (35%)
Tryp_SPc 123..359 CDD:238113 86/239 (36%)
GzmbNP_038570.1 Tryp_SPc 20..240 CDD:214473 84/237 (35%)
Tryp_SPc 21..243 CDD:238113 86/239 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.