DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6592 and gzm3.2

DIOPT Version :10

Sequence 1:NP_648016.1 Gene:CG6592 / 38687 FlyBaseID:FBgn0035669 Length:438 Species:Drosophila melanogaster
Sequence 2:XP_001341145.4 Gene:gzm3.2 / 100001065 ZFINID:ZDB-GENE-070912-133 Length:247 Species:Danio rerio


Alignment Length:239 Identity:76/239 - (31%)
Similarity:111/239 - (46%) Gaps:26/239 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 IFGGDVGNPHCFPYQVGMLLQRPKGLYWCGGSLISDKHVITAAHC-VDMAKRAL-VFLGANEIKN 185
            |.||.....|..||...  ||:.:. :.|||.||.:.:|:|:||| .:..|.:| :.|||:.| :
Zfish    26 IVGGREAKHHSRPYMAS--LQKKRN-HVCGGMLIKEDYVLTSAHCWNETDKYSLQIVLGAHNI-S 86

  Fly   186 AKEKGQVRLMVPSENFQIYPTWNPKRLKDDIAIVRLPHAVSFNERIHPIQLPKRHYEYRSFKNKL 250
            .||..|..:.|  |.:       .|..|.||.:::|......|..:..|.|||  :|........
Zfish    87 QKENSQQIIQV--EKY-------IKHRKFDIMLLKLRTKAVLNHFVDIINLPK--HEISILAPLE 140

  Fly   251 AIASGWGRYATGVHAISNVLRYVQLQIIDGRTCKSNFPLSYRGTN-ICTSGRNARSTCNGDSGGP 314
            ...:|||....|..| |||||.|.||:.....|||.:...:...| :||.....::.|.||||.|
Zfish   141 CSIAGWGMKRPGEGA-SNVLRVVNLQLESNAKCKSKWQTHFNFKNMVCTVSDGKKAFCQGDSGSP 204

  Fly   315 LVLQRRHSKKRVLVGITSFGSIYGCD-RGYPAAFTKVASYLDWI 357
            |:....      |.|:.::.....|. :.||..:.||:::|.||
Zfish   205 LLCNSE------LYGMAAYTYPKNCTFKEYPEVYMKVSAFLPWI 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6592NP_648016.1 Tryp_SPc 123..359 CDD:238113 76/239 (32%)
gzm3.2XP_001341145.4 Tryp_SPc 26..245 CDD:238113 76/239 (32%)

Return to query results.
Submit another query.