DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon65Ai and Tpsab1

DIOPT Version :9

Sequence 1:NP_001286951.1 Gene:Jon65Ai / 38685 FlyBaseID:FBgn0035667 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:285 Identity:88/285 - (30%)
Similarity:126/285 - (44%) Gaps:49/285 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKVLAVLLL------GVIASATAFEKPVFWKDVPVGKASIEGRITMGYPAYEGKVPYIVGLGFSK 59
            :::|.:|||      .::.:|.:...|            .|| |..|..|...|.|:.|.|..:.
  Rat    36 VRMLKLLLLTLPLLSSLVHAAPSLAMP------------REG-IVGGQEASGNKWPWQVSLRVND 87

  Fly    60 NGGGTWCGGSIIGNTWVMTAKHCTDGMESVTIYYGALWRLQAQYTH--------WVGRSDF-IEH 115
            .....:||||:|...||:||.||....::.........|.|..|.|        .:...|| |..
  Rat    88 TYWMHFCGGSLIHPQWVLTAAHCVGPNKADPNKLRVQLRKQYLYYHDHLLTVSQIISHPDFYIAQ 152

  Fly   116 GSGDISLIR-TPHVDFWSLVNKVELPRYDDRYNNYQGWWALVSGWGKTSDEGGVSE--YLNCVDV 177
            ...||:|:: |..|:..|.|:.|.||...:.:.:....|  |:|||..:::..:..  .|..|.|
  Rat   153 DGADIALLKLTNPVNITSNVHTVSLPPASETFPSGTLCW--VTGWGNINNDVSLPPPFPLEEVQV 215

  Fly   178 QIGENSVCENYY--GSFSG--------DLICIPTPENKGTCSGDSGGPLV--IHDGNRQVGIVSF 230
            .|.||.:|:..|  |..:|        |::|... |...:|.||||||||  :.|...|.|:||:
  Rat   216 PIVENRLCDLKYHKGLNTGDNVHIVRDDMLCAGN-EGHDSCQGDSGGPLVCKVEDTWLQAGVVSW 279

  Fly   231 GSSAGCLS-NGPKGMVRVTSYLDWI 254
            |.  ||.. |.|....|||.|||||
  Rat   280 GE--GCAQPNRPGIYTRVTYYLDWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AiNP_001286951.1 Tryp_SPc 37..254 CDD:214473 78/241 (32%)
Tryp_SPc 41..257 CDD:238113 79/239 (33%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:214473 78/240 (33%)
Tryp_SPc 66..302 CDD:238113 78/240 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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