DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon65Ai and psh

DIOPT Version :10

Sequence 1:NP_648015.1 Gene:Jon65Ai / 38685 FlyBaseID:FBgn0035667 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:251 Identity:66/251 - (26%)
Similarity:102/251 - (40%) Gaps:44/251 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ITMGYPAYEGKVPYIVGLGFSKNGGGTWCGGSIIGNTWVMTAKHC--TDGMESVTIYYGA--LWR 98
            |..|||...|..|::..:|:...|....||||:|.:.:|:||.||  ||......:..||  :..
  Fly   144 IVGGYPVDPGVYPHMAAIGYITFGTDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIEN 208

  Fly    99 LQAQYTHWVGRS-----DFIEHGSGDISL-------IRTPHVDFWSLVNKVELPRYDDRYNNYQG 151
            ....|...|.||     .::.:...||::       :.|.::....|......|..:.::     
  Fly   209 PDHSYQDIVIRSVKIHPQYVGNKYNDIAILELERDVVETDNIRPACLHTDATDPPSNSKF----- 268

  Fly   152 WWALVSGWGKTS-DEGGVSEYLNCVDVQIGENSVCENYYGSFSG-----------DLIC-IPTPE 203
               .|:|||..: .....|:.|....:::.....|...|....|           .|:| |....
  Fly   269 ---FVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKL 330

  Fly   204 NKGTCSGDSGGPLV----IHDGNRQV-GIVSFGSSAGCLSNGPKGMVRVTSYLDWI 254
            ....|.|||||||:    :.||...: |::|  |..||.:..|....||:||||:|
  Fly   331 IADACKGDSGGPLIHELNVEDGMYTIMGVIS--SGFGCATVTPGLYTRVSSYLDFI 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AiNP_648015.1 Tryp_SPc 37..254 CDD:214473 65/249 (26%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 66/251 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.