DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon65Ai and Gzmc

DIOPT Version :10

Sequence 1:NP_648015.1 Gene:Jon65Ai / 38685 FlyBaseID:FBgn0035667 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_599159.1 Gene:Gzmc / 171290 RGDID:620019 Length:248 Species:Rattus norvegicus


Alignment Length:257 Identity:70/257 - (27%)
Similarity:109/257 - (42%) Gaps:54/257 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VPVGKASIEGRITMGYPAYEGKVPYIVGLGF-SKNGGGTWCGGSIIGNTWVMTAKHCTDGMESVT 90
            :|:|..:.|  |..|........||:....| :.||..|:|||.::.:.:|:||.||..  .|:|
  Rat    12 LPLGARAEE--IIGGNEVSPHSRPYMAYFEFLNDNGKKTFCGGFLVRDNFVLTAAHCRG--RSMT 72

  Fly    91 IYYGALWRLQAQYTHWVGRSDFIEH-----------------GSGDISLI-------RTPHVDFW 131
            :..||         |.:...:..:.                 .|.||.|:       ||      
  Rat    73 VTLGA---------HNIKAKEKTQQIIPVANATPHPAYNPDKRSNDIMLLKLVRSAKRT------ 122

  Fly   132 SLVNKVELPRYDDRYNNYQGWWALVSGWGKTSDEGGVSEYLNCVDVQIGENSVCENYY--GSFSG 194
            |.|..:.|||.:....  .|....::||||.:.:|.....|..|::.:.::.|||:.:  .....
  Rat   123 SAVRPLNLPRRNAHVK--PGDVCYMAGWGKITPQGEFPNTLREVELTVQKDRVCESQFQRSYIKA 185

  Fly   195 DLICIPTPENKG-TCSGDSGGPLVIHDGNRQVGIVSFGSSAGCLSNGPKGMVRVTSYLDWIR 255
            ..||:...:.|| :...|||||||..  ....||||:|.:.|   :.|:...||.|:|.||:
  Rat   186 SEICVGDSKTKGASFEEDSGGPLVCK--KAAAGIVSYGKTDG---SAPQVFTRVLSFLSWIK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AiNP_648015.1 Tryp_SPc 37..254 CDD:214473 65/244 (27%)
GzmcNP_599159.1 Tryp_SPc 21..244 CDD:238113 67/246 (27%)

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