DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon65Aiii and CG17239

DIOPT Version :10

Sequence 1:NP_648013.1 Gene:Jon65Aiii / 38683 FlyBaseID:FBgn0035665 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster


Alignment Length:275 Identity:75/275 - (27%)
Similarity:114/275 - (41%) Gaps:56/275 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VVFALALATASAGLLPQQVPIHPRDLPAVTNIEGRITNGKTATSGQFPYQVGLSFASTSGSWWCG 69
            :..|.::...|:..:|:                 ||..|...|....|:|..:   ...|.:.||
  Fly     6 IFLAFSVTVVSSNWIPE-----------------RIVGGDLITILSVPWQASI---LRLGRFHCG 50

  Fly    70 GSIIDNTWVLTAAHCTSG----------ASAVTIYYGATVRTSAQLVQTVSADNFVQHASYNSIV 124
            .:|.....|:|||||.:.          .|:.|.:.|..||.|:.|:          |..|:. .
  Fly    51 AAIYSEDIVITAAHCLTDRETEFLSVRVGSSFTFFGGQVVRVSSVLL----------HEEYDQ-S 104

  Fly   125 LRNDISLIKTPTVAFTALINKVELPAIAGTYSTYTGQQAIASGWGKTSDSATSVANTLQYEVFEV 189
            ..|||::::..:.  ..|.:.|.:..:|.| ...:|..|..||||..........:.|...| ::
  Fly   105 WSNDIAVMRLQSK--LRLGSAVSVIPLADT-PPASGSPATVSGWGAIGFKKNYPMSILSASV-DI 165

  Fly   190 VSVSQCQNTYGSLVATNNVICVATPNKVSTCNGDSGGPLVLVSDSKLIGVTSFVSSAGCESG--- 251
            |...||:.:||..: |.::||.|.|.| ..|:||||||  |||.:||:|:.||    |.|..   
  Fly   166 VDQDQCRRSYGRKI-TKDMICAAAPGK-DACSGDSGGP--LVSGNKLVGIVSF----GKECAHPE 222

  Fly   252 APAGFTRVTSYLDWI 266
            .|..:..|.....||
  Fly   223 YPGVYANVAELKPWI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AiiiNP_648013.1 Tryp_SPc 39..266 CDD:214473 70/239 (29%)
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 69/238 (29%)

Return to query results.
Submit another query.