DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon65Aiii and CG7542

DIOPT Version :10

Sequence 1:NP_648013.1 Gene:Jon65Aiii / 38683 FlyBaseID:FBgn0035665 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster


Alignment Length:274 Identity:112/274 - (40%)
Similarity:162/274 - (59%) Gaps:22/274 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKVLVVFALALATASAGLLPQQVPIHPRDLPAVTNIEGRITNGKTATSGQFPYQVGLSFASTSGS 65
            |..|:|..|.:.:.:|             :|.:|::|..||||:.|..||||||.||:.:..:.|
  Fly     1 MMKLLVCVLLVGSCTA-------------VPLLTDVEPYITNGEPAEVGQFPYQAGLNVSFGNWS 52

  Fly    66 WWCGGSIIDNTWVLTAAHCTSGASAVTIYYGA-TVRTSAQLVQ---TVSADNFVQHASYNSIVLR 126
            .||||::|.:.|::|||||..||.:||:|.|| .:...::..|   .|.....:.|::|.:..:.
  Fly    53 TWCGGTLISHYWIITAAHCMDGAESVTVYLGAINIGDESEEGQERIMVEKSGIIVHSNYMASTVV 117

  Fly   127 NDISLIKTPT-VAFTALINKVELP-AIAGTYSTYTGQQAIASGWGKTSDSATSVANTLQYEVFEV 189
            ||||||:.|. |.||..|....|| .:.|.:.||...:|.|||||:.||::.||:..|:|....:
  Fly   118 NDISLIRLPAFVGFTDRIRAASLPRRLNGQFPTYESIRAFASGWGRESDASDSVSPVLRYVEMPI 182

  Fly   190 VSVSQCQNTYGSLVATNNVICVATPNKVSTCNGDSGGPLVLV--SDSKLIGVTSFVSSAGCESGA 252
            :..|.|: .|.|...:..:||::|.:..|||:||||||||..  :.|.|||.|||.:|.||:.|.
  Fly   183 MPHSLCR-MYWSGAVSEKMICMSTTSGKSTCHGDSGGPLVYKQGNSSYLIGSTSFGTSMGCQVGF 246

  Fly   253 PAGFTRVTSYLDWI 266
            ||.|||::||||||
  Fly   247 PAVFTRISSYLDWI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AiiiNP_648013.1 Tryp_SPc 39..266 CDD:214473 102/234 (44%)
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 104/235 (44%)

Return to query results.
Submit another query.