DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon65Aiii and CG40160

DIOPT Version :10

Sequence 1:NP_648013.1 Gene:Jon65Aiii / 38683 FlyBaseID:FBgn0035665 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster


Alignment Length:241 Identity:65/241 - (26%)
Similarity:94/241 - (39%) Gaps:32/241 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GQFPYQVGLSFASTSGSWWCGGSIIDNTWVLTAAHCTSGASAVTIYYGATVRTSAQLVQTV---- 109
            |:||:.|.| ..|.:.|::|.||:|....|||||||.......:.    |||......||:    
  Fly   174 GEFPWTVAL-LHSGNLSYFCAGSLIHKQVVLTAAHCVESLRTGSF----TVRAGEWDTQTMKERL 233

  Fly   110 -----SADNFVQHASYNSIVLRNDISL-IKTPTVAFTALINKVELPAIAGTYSTYTGQQAIASGW 168
                 |....:.|..||...:..|.:| |.:..|.....||.:.||.....  ...|....::||
  Fly   234 PYQERSVQTVILHPDYNRRSIAYDFALVILSQPVTLDDHINVICLPQQDDI--PQPGNTCFSTGW 296

  Fly   169 GKTSDSATSVANTLQYEV-FEVVSVSQCQ-----NTYGSLVATN-NVICVATPNKVSTCNGDSGG 226
            ||.:..:....::|...| ..:|..:.||     ...|...|.: :.||......:.||.||.|.
  Fly   297 GKDAFGSLGKYSSLMKRVPLPIVEFNSCQTRLRGTRLGPKFALDRSFICAGGQRGIDTCQGDGGA 361

  Fly   227 PLVLVSDS------KLIGVTSFVSSAGCESGAPAGFTRVTSYLDWI 266
            ||.....|      :..|:.::  ..||....||.:..|.....||
  Fly   362 PLACPRGSTRESRYQQTGIVAW--GIGCNDEVPAAYANVALVRGWI 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AiiiNP_648013.1 Tryp_SPc 39..266 CDD:214473 63/239 (26%)
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709
Tryp_SPc 166..408 CDD:238113 65/241 (27%)
Blue background indicates that the domain is not in the aligned region.

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