DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon65Aiv and Ctrb1

DIOPT Version :10

Sequence 1:NP_648012.1 Gene:Jon65Aiv / 38682 FlyBaseID:FBgn0250815 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_079859.2 Gene:Ctrb1 / 66473 MGIID:88559 Length:263 Species:Mus musculus


Alignment Length:275 Identity:87/275 - (31%)
Similarity:140/275 - (50%) Gaps:27/275 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFL-IILALAVAASAF--PEPELRHRSREMPVVGDIGGRITGGSNAAVGQFPYQVGLSLKLSAL 62
            |.|| ::...|:..:.|  ..|.::      ||:..: .||..|.:|..|.:|:||.|.   ...
Mouse     1 MAFLWLVSCFALVGATFGCGVPAIQ------PVLTGL-SRIVNGEDAIPGSWPWQVSLQ---DRT 55

  Fly    63 SSAWCGGSLIGSTWVLTAAHCTDGVQSVTVYLGATV--RTSAEITHTVSSSDIIIHSGWNSANLR 125
            ...:||||||...||:|||||  ||::..|.:....  .:..|....:..:.:..:..:||..:|
Mouse    56 GFHFCGGSLISENWVVTAAHC--GVKTTDVVVAGEFDQGSDEENVQVLKIAQVFKNPKFNSFTVR 118

  Fly   126 NDISLIKI--PATSSSSRISAVKLPSISNSYSTFVGDVAVASGWGRTSDTSSGVATNLQYVDLTV 188
            |||:|:|:  ||..|.: :|||.||::.:.:.  .|.:...:|||:|...:......||...|.:
Mouse   119 NDITLLKLATPAQFSET-VSAVCLPTVDDDFP--AGTLCATTGWGKTKYNALKTPDKLQQAALPI 180

  Fly   189 ITNTKCAQTYGTSVVTDSTLCVATTDAKSTCNGDSGGPLVLKSSS--EQIGLTSFGASAGCEKGY 251
            ::..||.:::| |.:||..:| |.....|:|.||||||||.:...  ...|:.|:| |..|....
Mouse   181 VSEAKCKESWG-SKITDVMIC-AGASGVSSCMGDSGGPLVCQKDGVWTLAGIVSWG-SGFCSTST 242

  Fly   252 PAAFTRVTSYLDWIK 266
            ||.:.|||:.:.|::
Mouse   243 PAVYARVTALMPWVQ 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AivNP_648012.1 Tryp_SPc 37..265 CDD:214473 78/233 (33%)
Ctrb1NP_079859.2 Tryp_SPc 34..259 CDD:238113 78/235 (33%)

Return to query results.
Submit another query.