DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon65Aiv and Tpsab1

DIOPT Version :9

Sequence 1:NP_648012.1 Gene:Jon65Aiv / 38682 FlyBaseID:FBgn0250815 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:283 Identity:92/283 - (32%)
Similarity:131/283 - (46%) Gaps:42/283 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIILALAVAAS---AFPEPELRHRSREMPVVGDIGGRITGGSNAAVGQFPYQVGLSLKLSALSSA 65
            |::|.|.:.:|   |.|       |..||..|     |.||..|:..::|:||.|.:.    .:.
  Rat    41 LLLLTLPLLSSLVHAAP-------SLAMPREG-----IVGGQEASGNKWPWQVSLRVN----DTY 89

  Fly    66 W---CGGSLIGSTWVLTAAHCTDGVQSVTVYLGATVRTSAEI--THTVSSSDIIIHSGWNSANLR 125
            |   ||||||...||||||||....::....|...:|.....  .|.::.|.||.|..:..|...
  Rat    90 WMHFCGGSLIHPQWVLTAAHCVGPNKADPNKLRVQLRKQYLYYHDHLLTVSQIISHPDFYIAQDG 154

  Fly   126 NDISLIKIP-ATSSSSRISAVKLPSISNSYSTFVGDVAVASGWGR-TSDTSSGVATNLQYVDLTV 188
            .||:|:|:. ..:.:|.:..|.||..|.::.:  |.:...:|||. .:|.|......|:.|.:.:
  Rat   155 ADIALLKLTNPVNITSNVHTVSLPPASETFPS--GTLCWVTGWGNINNDVSLPPPFPLEEVQVPI 217

  Fly   189 ITNTKCAQTY--------GTSVVTDSTLCVATTDAKSTCNGDSGGPLVLKSSSE--QIGLTSFGA 243
            :.|..|...|        ...:|.|..|| |..:...:|.||||||||.|....  |.|:.|:| 
  Rat   218 VENRLCDLKYHKGLNTGDNVHIVRDDMLC-AGNEGHDSCQGDSGGPLVCKVEDTWLQAGVVSWG- 280

  Fly   244 SAGC-EKGYPAAFTRVTSYLDWI 265
             .|| :...|..:||||.|||||
  Rat   281 -EGCAQPNRPGIYTRVTYYLDWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AivNP_648012.1 Tryp_SPc 37..265 CDD:214473 80/245 (33%)
Tryp_SPc 38..268 CDD:238113 82/246 (33%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:214473 80/244 (33%)
Tryp_SPc 66..302 CDD:238113 80/244 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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