DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon65Aiv and CG5390

DIOPT Version :10

Sequence 1:NP_648012.1 Gene:Jon65Aiv / 38682 FlyBaseID:FBgn0250815 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_609374.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster


Alignment Length:253 Identity:75/253 - (29%)
Similarity:114/253 - (45%) Gaps:26/253 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IGGRITGGSN--AAVGQFPYQVGLSLKLSALSSAWCGGSLIGSTWVLTAAHCTDGVQ--SVTVYL 94
            :|.:|||..|  |..|:||:.:.:..:...|:...|||:||....|||||||....|  |:.|..
  Fly   143 VGFKITGAVNQEAEFGEFPWMLAILREEGNLNLYECGGALIAPNVVLTAAHCVHNKQPSSIVVRA 207

  Fly    95 GA-TVRTSAEITHTVSS--SDIIIHSGWNSANLRNDIS--LIKIPATSSSSRISAVKLPSISNSY 154
            |. ..:|..||......  .:||.|..:|..:|.||::  |::.|.|...: |..|.||::.:.:
  Fly   208 GEWDTQTQTEIRRHEDRYVKEIIYHEQFNKGSLYNDVAVMLLESPFTLQEN-IQTVCLPNVGDKF 271

  Fly   155 STFVGDVAVASGWGRTSDTSSG-VATNLQYVDLTVITNTKCAQTYGTS------VVTDSTLCVAT 212
            ..   |...|:|||:......| ....|:.||:.|:...:|......:      ::.||.:|...
  Fly   272 DF---DRCYATGWGKNKFGKDGEYQVILKKVDMPVVPEQQCETNLRETRLGRHFILHDSFICAGG 333

  Fly   213 TDAKSTCNGDSGGPLVL-----KSSSEQIGLTSFGASAGCEKGYPAAFTRVTSYLDWI 265
            ...|.||.||.|.|||.     |:..:..|:.::|...| |...|..:..|.....||
  Fly   334 EKDKDTCKGDGGSPLVCPIAGQKNRFKSAGIVAWGIGCG-EVNIPGVYASVAKLRPWI 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AivNP_648012.1 Tryp_SPc 37..265 CDD:214473 72/248 (29%)
CG5390NP_609374.1 CLIP_1 64..115 CDD:465709
Tryp_SPc 153..390 CDD:214473 68/241 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.