DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon65Aiv and Gzmb

DIOPT Version :10

Sequence 1:NP_648012.1 Gene:Jon65Aiv / 38682 FlyBaseID:FBgn0250815 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:277 Identity:91/277 - (32%)
Similarity:127/277 - (45%) Gaps:46/277 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFLIILALAVAASAFPEPELRHRSREMPVVGDIGGRITGGSNAAVGQFPYQVGLSLKLSALSSA 65
            ||.|::|   ::.|..|:.|              .|.|.||..|.....||...|.:......|.
  Rat     1 MKLLLLL---LSFSLAPKTE--------------AGEIIGGHEAKPHSRPYMAYLQIMDEYSGSK 48

  Fly    66 WCGGSLIGSTWVLTAAHCTDGVQSVTVYLGA-TVRTSAEITHTVSSSDIIIHSGWNSANLRNDIS 129
            .|||.||...:|||||||:.  ..:.|.||| .::...::...:....||.|..:||..:.|||.
  Rat    49 KCGGFLIREDFVLTAAHCSG--SKINVTLGAHNIKEQEKMQQIIPVVKIIPHPAYNSKTISNDIM 111

  Fly   130 LIKIPATSSSSRISAVK---LPSISNSYSTFVGDVAVASGWGRT------SDTSSGVATNLQYVD 185
            |:|:  .|.:.|.||||   ||  ..:.....|||...:|||:.      |||       ||.|:
  Rat   112 LLKL--KSKAKRSSAVKPLNLP--RRNVKVKPGDVCYVAGWGKLGPMGKYSDT-------LQEVE 165

  Fly   186 LTVITNTKCAQTYGTSVVTDSTLCVATTDAK-STCNGDSGGPLVLKSSSEQIGLTSFGASAGCEK 249
            |||..:.||...........:.:|......| ::..||||||||.|..:  .|:.|:|.:.|   
  Rat   166 LTVQEDQKCESYLKNYFDKANEICAGDPKIKRASFRGDSGGPLVCKKVA--AGIVSYGQNDG--- 225

  Fly   250 GYPAAFTRVTSYLDWIK 266
            ..|.|||:|:::|.|||
  Rat   226 STPRAFTKVSTFLSWIK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AivNP_648012.1 Tryp_SPc 37..265 CDD:214473 80/238 (34%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 83/240 (35%)

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