DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon65Aiv and Gzmc

DIOPT Version :10

Sequence 1:NP_648012.1 Gene:Jon65Aiv / 38682 FlyBaseID:FBgn0250815 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_599159.1 Gene:Gzmc / 171290 RGDID:620019 Length:248 Species:Rattus norvegicus


Alignment Length:269 Identity:86/269 - (31%)
Similarity:126/269 - (46%) Gaps:37/269 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIILALAVAASAFPEPELRHRSREMPVVGDIGGRITGGSNAAVGQFPYQVGLSLKLSALSSAWCG 68
            ||:|.|.:...|        |:.|          |.||:..:....||..............:||
  Rat     5 LILLTLLLPLGA--------RAEE----------IIGGNEVSPHSRPYMAYFEFLNDNGKKTFCG 51

  Fly    69 GSLIGSTWVLTAAHCTDGVQSVTVYLGA-TVRTSAEITHTVSSSDIIIHSGWNSANLRNDISLIK 132
            |.|:...:|||||||..  :|:||.||| .::...:....:..::...|..:|.....|||.|:|
  Rat    52 GFLVRDNFVLTAAHCRG--RSMTVTLGAHNIKAKEKTQQIIPVANATPHPAYNPDKRSNDIMLLK 114

  Fly   133 IPATSSSSRISAVK---LPSISNSYSTFVGDVAVASGWGRTSDTSSGVATN-LQYVDLTVITNTK 193
            :  ..|:.|.|||:   ||. .|:: ...|||...:|||:.  |..|...| |:.|:|||..:..
  Rat   115 L--VRSAKRTSAVRPLNLPR-RNAH-VKPGDVCYMAGWGKI--TPQGEFPNTLREVELTVQKDRV 173

  Fly   194 CAQTYGTSVVTDSTLCVATTDAK-STCNGDSGGPLVLKSSSEQIGLTSFGASAGCEKGYPAAFTR 257
            |...:..|.:..|.:||..:..| ::...|||||||.|.::  .|:.|:|.:.|   ..|..|||
  Rat   174 CESQFQRSYIKASEICVGDSKTKGASFEEDSGGPLVCKKAA--AGIVSYGKTDG---SAPQVFTR 233

  Fly   258 VTSYLDWIK 266
            |.|:|.|||
  Rat   234 VLSFLSWIK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon65AivNP_648012.1 Tryp_SPc 37..265 CDD:214473 76/233 (33%)
GzmcNP_599159.1 Tryp_SPc 21..244 CDD:238113 79/235 (34%)

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