DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6462 and Prss2l1

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_003749780.1 Gene:Prss2l1 / 683849 RGDID:1597830 Length:246 Species:Rattus norvegicus


Alignment Length:247 Identity:74/247 - (29%)
Similarity:108/247 - (43%) Gaps:31/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 RIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCLTDAIAAKIYTGATVFAD 140
            :|.||........||||.|   .||...  ||||||..|:|::||||....|..::         
  Rat    23 KIVGGYTCQENSVPYQVSL---NSGYHF--CGGSLINDQWVVSAAHCYKSRIQVRL--------- 73

  Fly   141 VEDSVEELQ-----VTHRDFIIYPDYLGFGGYSDLALIRLPRKVRTSEQVQPIELAGEFMHQNFL 200
            .|.::..|:     |.....|.:|::......:|:.||:|...|:.:.:|..:.|......    
  Rat    74 GEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAP---- 134

  Fly   201 VGKVVTLSGWGYLGDSTDKRTRLLQYLDAEVIDQERCICYFLPGLVSQRRHLCTDGSNGRGACNG 265
            .|....:||||...........|||.|||.::.|..|...: ||.::...........|:.:|.|
  Rat   135 AGTQCLISGWGNTLSFGVNEPDLLQCLDAPLLPQADCEASY-PGKITDNMVCAGFLEGGKDSCQG 198

  Fly   266 DSGGPVVYHWRNVSYLIGVTSFGSAEGCEV-GGPTVYTRITAYLPWIRQQTA 316
            |||||||.:    ..|.|:.|:|  .||.: ..|.|||::..|:.||....|
  Rat   199 DSGGPVVCN----GELQGIVSWG--YGCALPDNPGVYTKVCNYVDWIEDTIA 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 73/242 (30%)
Prss2l1XP_003749780.1 Tryp_SPc 24..242 CDD:238113 73/242 (30%)

Return to query results.
Submit another query.