DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6462 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:252 Identity:83/252 - (32%)
Similarity:125/252 - (49%) Gaps:29/252 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 RIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCLTDAIAAKIYTGATVFAD 140
            ||.||..|..|.:|:||.|  ||:  ::..|||:||:..:|||||||.......:.:|.....:.
  Rat   185 RIIGGTQAETGDWPWQVSL--QLN--NVHHCGGTLISNLWVLTAAHCFRSYSNPQQWTATFGVST 245

  Fly   141 VEDSVEELQVTHRDFIIYPDYLGFGGYSDLALIRLPRKVRTSEQVQPIELAGEFMHQNFLVGKVV 205
            :.   ..|:|..|..:.:.:|......:|:|:::|.|.|..:..:..:.|..  ..||.:...|.
  Rat   246 IS---PRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPVTFTRNIHRVCLPA--ATQNIIPDSVA 305

  Fly   206 TLSGWGYL--GDSTDKRTRLLQYLDAEVIDQERC---ICY---FLPGLVSQRRHLCTDGSNGR-G 261
            .::|||.|  |.:|   ...||..:..::..|.|   ..|   .|||:      ||....:|. .
  Rat   306 YVTGWGSLTYGGNT---VTNLQQGEVRIVSSEVCNEPAGYGGSVLPGM------LCAGVRSGAVD 361

  Fly   262 ACNGDSGGPVVYH-WRNVSYLIGVTSFGSAEGCEVGGPTVYTRITAYLPWIRQQTAM 317
            ||.||||||:|.. .|.:.:::|:.|:|...|.. ..|.||||:|||..||||||.:
  Rat   362 ACQGDSGGPLVQEDTRRLWFVVGIVSWGYQCGLP-NKPGVYTRVTAYRNWIRQQTGI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 79/246 (32%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 79/246 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.