DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6462 and Tmprss2

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_056590.2 Gene:Tmprss2 / 50528 MGIID:1354381 Length:490 Species:Mus musculus


Alignment Length:272 Identity:80/272 - (29%)
Similarity:138/272 - (50%) Gaps:39/272 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LRCEKFEMEGNQTAAVRTRIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHC 122
            |||.:.   |.::...::||.||..|:.|.:|:||.|.:|  |..:  ||||:||.::::|||||
Mouse   238 LRCIEC---GVRSVKRQSRIVGGLNASPGDWPWQVSLHVQ--GVHV--CGGSIITPEWIVTAAHC 295

  Fly   123 LTDAIAAKIYTGATVFADV----------EDSVEELQVTHRDFIIYPDYLGFGGYSDLALIRLPR 177
            :.:.:::..|.  |.||.:          ...||::       |.:|:|......:|:||::|..
Mouse   296 VEEPLSSPRYW--TAFAGILRQSLMFYGSRHQVEKV-------ISHPNYDSKTKNNDIALMKLQT 351

  Fly   178 KVRTSEQVQPIELAGEFMHQNFLVGKVVTLSGWGYLGDSTDKRTRLLQYLDA---EVIDQERCIC 239
            .:..::.|:|:.|....|..:  :.:...:||||    :|.::.:....|:|   .:|:..:|..
Mouse   352 PLAFNDLVKPVCLPNPGMMLD--LDQECWISGWG----ATYEKGKTSDVLNAAMVPLIEPSKCNS 410

  Fly   240 YFLPGLVSQRRHLCTDGSNGR-GACNGDSGGPVVYHWRNVSYLIGVTSFGSAEGC-EVGGPTVYT 302
            .::...:.....:|.....|. .:|.||||||:|.....:.:|||.||:||  || :...|.||.
Mouse   411 KYIYNNLITPAMICAGFLQGSVDSCQGDSGGPLVTLKNGIWWLIGDTSWGS--GCAKALRPGVYG 473

  Fly   303 RITAYLPWIRQQ 314
            .:|.:..||.||
Mouse   474 NVTVFTDWIYQQ 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 73/251 (29%)
Tmprss2NP_056590.2 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747 4/11 (36%)
Tryp_SPc 254..485 CDD:238113 73/251 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.