DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6462 and tpsab1

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_002941509.1 Gene:tpsab1 / 497002 XenbaseID:XB-GENE-5892149 Length:326 Species:Xenopus tropicalis


Alignment Length:252 Identity:81/252 - (32%)
Similarity:126/252 - (50%) Gaps:26/252 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 RIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCLTDAIAAKIYTGATVFAD 140
            |||||..||:|.||:||  .:.|.|.  :.|||:|::..:|||:|.||....|:.:   ..:...
 Frog    38 RIAGGHEATKGEFPWQV--AVWLPGK--MFCGGTLLSNTWVLTSAQCLDGHNASSV---VVILGS 95

  Fly   141 VE---DSVEELQVTHRDFIIYPDYLGFGGYS-DLALIRLPRKVRTSEQVQPIELAGEFMHQNFLV 201
            ::   :..||..:..:..||:| |..|..|| |||||.|.:.|..:..:.|:.|....:  .|..
 Frog    96 IKLSGNPKEETAIPAKRIIIHP-YYYFSNYSGDLALIELEKPVDFTTYITPLCLPPPTV--TFTP 157

  Fly   202 GKVVTLSGWGY--LGDSTDKRTRLLQYLDAEVIDQERCICYF-------LPGLVSQRRHLCTDGS 257
            |::..::|||.  ..|| :..:.:|:..:..:|..|.|..|:       :.|.|.....:|....
 Frog   158 GQLCYVAGWGQKKFNDS-EGISDVLRGAEVRLITSELCQDYYNMKNDYNITGDVITNDTICARDI 221

  Fly   258 NG-RGACNGDSGGPVVYHWRNVSYLIGVTSFGSAEGCEVGGPTVYTRITAYLPWIRQ 313
            :| ...|.||.|||:.....|..|::||.||....| |:|.|.|||.:..|:.||::
 Frog   222 HGVHRICRGDGGGPLACPAGNSWYVVGVASFVVLCG-EMGHPGVYTSVPYYMDWIQE 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 80/251 (32%)
tpsab1XP_002941509.1 Tryp_SPc 39..277 CDD:238113 80/249 (32%)

Return to query results.
Submit another query.