DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6462 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:254 Identity:74/254 - (29%)
Similarity:120/254 - (47%) Gaps:33/254 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 RIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCLTDAIAAKIYTGATVFAD 140
            ::|||:.|..|.:|:|.    .|...::.:||.:||:..:::|||||...:...|.:..:..|. 
  Rat   199 KVAGGQDAEEGEWPWQA----SLQQNNVHRCGATLISNSWLITAAHCFVRSANPKDWKVSFGFL- 258

  Fly   141 VEDSVEELQVTHRDFIIYPDYLGFGGYSDLALIRLPRKVRTSEQVQPIELAGEFMHQNFLVGKVV 205
              .|..:.|...:..:|:.:|......:|:|::||...|.....::...|..  ..|.|.....|
  Rat   259 --LSKPQAQRAVKSIVIHENYSYPAHNNDIAVVRLSSPVLYENNIRRACLPE--ATQKFPPNSDV 319

  Fly   206 TLSGWGYL---GDSTDKRTRLLQYLDAEVIDQERCIC------YFLPGLVSQRRHLCTDGSNGR- 260
            .::|||.|   |||.:    :||....::||.:.|..      ...||:      ||.....|| 
  Rat   320 VVTGWGTLKSDGDSPN----ILQKGRVKIIDNKTCNSGKAYGGVITPGM------LCAGFLEGRV 374

  Fly   261 GACNGDSGGPVVYH-WRNVSYLIGVTSFGSAEGCEV-GGPTVYTRITAYLPWIRQQTAM 317
            .||.||||||:|.. .:.:.:|.|:.|:|  :.|.: ..|.||||:|.|..||..:|.:
  Rat   375 DACQGDSGGPLVSEDSKGIWFLAGIVSWG--DECALPNKPGVYTRVTHYRDWISSKTGL 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 73/248 (29%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 73/248 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.