DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6462 and Tmprss4

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:260 Identity:78/260 - (30%)
Similarity:121/260 - (46%) Gaps:56/260 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 TRIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCL---TDAIAAKIYTGAT 136
            ||:.||..|:...:|:||.  ||.:...:  ||||::...::||||||.   .|..:.|:..|:.
  Rat   244 TRVVGGVEASADSWPWQVS--IQYNKQHV--CGGSILDHHWILTAAHCFRKYLDVSSWKVRAGSN 304

  Fly   137 VFADVEDSVEELQVTHRDFIIYPDYLGFGGYSDLALIRLPRKVRTSEQVQPIELAGEFMHQNFLV 201
            ...: ..|:...::    ||..|:.|. ....|:||::|...:..|..|:||.|  .|..:..:.
  Rat   305 KLGN-SPSLPVAKI----FIAEPNPLQ-PKEKDIALVKLKMPLTFSGSVRPICL--PFSDEELIP 361

  Fly   202 GKVVTLSGWGYLGDSTDKRTRLLQYLDAEVIDQERC--------------ICYFLPGLVSQRRHL 252
            ...|.:.|||:..::..|.:..|.....:|||..||              :|...|         
  Rat   362 TMPVWVIGWGFTEENGGKMSDTLLQASVQVIDSARCNAEDAYQGEVTAGMLCAGTP--------- 417

  Fly   253 CTDGSNGRGACNGDSGGPVVYH---WRNVSYLIGVTSFGSAEGCEVGGPT---VYTRITAYLPWI 311
                ..|:..|.||||||::||   |:    ::|:.|:|  .||  |.|:   |||::||||.||
  Rat   418 ----QGGKDTCQGDSGGPLMYHYDKWQ----VVGIVSWG--YGC--GSPSTPGVYTKVTAYLDWI 470

  Fly   312  311
              Rat   471  470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 76/258 (29%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597
Tryp_SPc 245..470 CDD:214473 75/257 (29%)
Blue background indicates that the domain is not in the aligned region.

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