DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6462 and Tpsg1

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001426649.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:320 Species:Rattus norvegicus


Alignment Length:260 Identity:89/260 - (34%)
Similarity:125/260 - (48%) Gaps:37/260 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 QTAAVRTRIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCLTDAIAAKIYT 133
            |.:...:||.||..|..|.:|:|..|.:|    .:..|||||::.::|||||||         ::
  Rat    31 QVSHAGSRIVGGHAAQAGAWPWQASLRLQ----KVHVCGGSLLSPEWVLTAAHC---------FS 82

  Fly   134 GATVFADVEDSVEELQVT---H----RDFIIYPDYLGFGGYS-DLALIRLPRKVRTSEQVQPI-- 188
            |:...:|.|..:.||.:|   |    :..|:|....|..|.| |:||::|...|..|.||||:  
  Rat    83 GSVNSSDYEVHLGELTITLSPHFSTVKQIIMYSSAPGPPGSSGDIALVQLATPVALSSQVQPVCL 147

  Fly   189 -ELAGEFMHQNFLVGKVVTLSGWGYLGDSTD-KRTRLLQYLDAEVIDQERCICYFLP--GLVSQR 249
             |.:.:| |.    |....::||||..:... |....||.....|:|.|.|...:..  |.:.|.
  Rat   148 PEASADF-HP----GMQCWVTGWGYTQEGEPLKPPYNLQEAKVSVVDVETCSQAYSSSNGSLIQS 207

  Fly   250 RHLCTDGSNGRGACNGDSGGPVVYHWRNVSYLIGVTSFGSAEGC-EVGGPTVYTRITAYLPWIRQ 313
            ..||..|..  .||..|||||:|.....:....||.|:|  ||| ....|.||.|:|||:.||.:
  Rat   208 DMLCAWGPG--DACQDDSGGPLVCRVAGIWQQAGVVSWG--EGCGRPDRPGVYARVTAYVNWIHR 268

  Fly   314  313
              Rat   269  268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 87/252 (35%)
Tpsg1NP_001426649.1 None

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