DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6462 and Tpsg1

DIOPT Version :9

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_783183.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:311 Species:Rattus norvegicus


Alignment Length:260 Identity:89/260 - (34%)
Similarity:125/260 - (48%) Gaps:37/260 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 QTAAVRTRIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCLTDAIAAKIYT 133
            |.:...:||.||..|..|.:|:|..|.:|    .:..|||||::.::|||||||         ::
  Rat    22 QVSHAGSRIVGGHAAQAGAWPWQASLRLQ----KVHVCGGSLLSPEWVLTAAHC---------FS 73

  Fly   134 GATVFADVEDSVEELQVT---H----RDFIIYPDYLGFGGYS-DLALIRLPRKVRTSEQVQPI-- 188
            |:...:|.|..:.||.:|   |    :..|:|....|..|.| |:||::|...|..|.||||:  
  Rat    74 GSVNSSDYEVHLGELTITLSPHFSTVKQIIMYSSAPGPPGSSGDIALVQLATPVALSSQVQPVCL 138

  Fly   189 -ELAGEFMHQNFLVGKVVTLSGWGYLGDSTD-KRTRLLQYLDAEVIDQERCICYFLP--GLVSQR 249
             |.:.:| |.    |....::||||..:... |....||.....|:|.|.|...:..  |.:.|.
  Rat   139 PEASADF-HP----GMQCWVTGWGYTQEGEPLKPPYNLQEAKVSVVDVETCSQAYSSSNGSLIQS 198

  Fly   250 RHLCTDGSNGRGACNGDSGGPVVYHWRNVSYLIGVTSFGSAEGC-EVGGPTVYTRITAYLPWIRQ 313
            ..||..|..  .||..|||||:|.....:....||.|:|  ||| ....|.||.|:|||:.||.:
  Rat   199 DMLCAWGPG--DACQDDSGGPLVCRVAGIWQQAGVVSWG--EGCGRPDRPGVYARVTAYVNWIHR 259

  Fly   314  313
              Rat   260  259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 76..311 CDD:214473 86/249 (35%)
Tryp_SPc 77..314 CDD:238113 87/252 (35%)
Tpsg1NP_783183.1 Tryp_SPc 29..257 CDD:214473 86/249 (35%)
Tryp_SPc 30..260 CDD:238113 87/252 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346429
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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