DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6462 and Prss42

DIOPT Version :10

Sequence 1:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001100333.2 Gene:Prss42 / 301027 RGDID:1562548 Length:340 Species:Rattus norvegicus


Alignment Length:336 Identity:94/336 - (27%)
Similarity:142/336 - (42%) Gaps:57/336 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLLSSTLVKSSEPW-----LDTFEHPK--EETPDDDD-----------AIMERRWQLGYENFRL 58
            ||||..   |..|.|     |.|...|.  .|:|.::.           |......:..:.||.:
  Rat    14 LLLLQP---KPCEAWAAASILSTSGFPSGLSESPGENSPPPTPVHTSKVASQGSTTRFPFTNFSI 75

  Fly    59 RCEKFEMEGNQTAAVRTRIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCL 123
            .|.:..|          :|.||..|..|.:|:||.|.::    .:..|||||:..|:|||||||:
  Rat    76 VCGQPLM----------KIMGGVDAEEGKWPWQVSLRVR----HMHVCGGSLLNSQWVLTAAHCI 126

  Fly   124 TDAIAAKIYTG-ATVFADVEDSVEELQVTHRDFIIYPDY-LGFGGYSDLALIRLPRKVRTSEQVQ 186
            ...:...:..| .:|:......|..:|    :..::|.: ......:|:||::|.:.|..:..:.
  Rat   127 HSRVQYNVKMGDRSVYRQNTSLVIPIQ----NIFVHPKFSTTTVVQNDIALLKLQQPVNFTSSIH 187

  Fly   187 PIELAGEFMHQNFLVGKVVTLSGWGYLGDSTDK-RTRLLQYLDAEVIDQERCICYFLPGLVS--- 247
            ||.:.....|..  .|....::|||.......: .|.:||.:|..:|..|.| ...|..:.|   
  Rat   188 PICVPTGTFHVK--AGTKCWVTGWGKPDPGAPQIPTEILQEVDQSIILYEEC-NEMLKKMASTSV 249

  Fly   248 ---QRRHLCTDGSNGRGACNGDSGGPVVYHWRNVSYLIGVTSFGSAEGC-EVGGPTVYTRITAYL 308
               :|..:|.....|:.||.||||||:...:.|....|||.|:|.  || ..|.|.|||.:..|.
  Rat   250 DLVKRGMVCAYKEGGKDACQGDSGGPLSCEFDNRWVQIGVVSWGI--GCGRKGHPGVYTDVAFYN 312

  Fly   309 PW---IRQQTA 316
            .|   :..|||
  Rat   313 KWLITVVNQTA 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6462NP_648011.1 Tryp_SPc 77..314 CDD:238113 74/249 (30%)
Prss42NP_001100333.2 Tryp_SPc 84..315 CDD:238113 73/243 (30%)

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